| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3432 |
|---|
| Symbol | |
|---|
| ID | 9247299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4106617 |
|---|
| End bp | 4109565 |
|---|
| Gene Length | 2949 bp |
|---|
| Protein Length | 982 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_003681343 |
|---|
| Protein GI | 297562369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.368499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.260394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAG ACGACCGCGA GGACGCCCGG CGCGGCGAGG AGGGCGGAGC CGAGCCGTCC
CGCTGGAAGG GCGGCAGACC CGCCTCGGGA ACCGGTCCCC GCCTCGGCGG CCTGTTCGAC
GGGCTCCCCG AGAGCGGGCG CGGCGCCCGG GCCCAACCCC CGCGCGGCTC CTCGGGCACG
GCCAACCCGT TCCGGCAGCG GCCCCGGCCC CCCGCGCCGG CCGACCCCGC GCCACGGGTC
CCCTCCGCCC CGGTCTCGCC CTACGGCGCG CTTCCCCTGG ACATCCCCCC GGCCCCGCGA
CCGGAGGCCG AGCCGACGGT CGAGCTCGCG GCGGACGCGC CGTCGCCGAC CGGGTCGCCG
CACCGGCCCG ACGTCATCCC CTTCCGCGGC GGCGAGCGCC CCGCCGGGAG CGATGCGGCC
AGCCCGGGAG CCGTGCCGAG TCCGGTTCCC GGGAGCCCCG AGAGCCAGGC GGGCCCGGAG
TGGACCGTTC CCTCCGCCGA GTCCGAACAT CCGGCGGAGC CCAGCGGTCC GGCCGAGCCG
GAGCCCCTGG CCGAGCCGGA GCCCTCGACG GCGCTCGCGG ACGCTGCCGC GCTCGCGAGG
TCGGCGGTGC TCGCGAAGGC GGCGCGCCCA CAGGAGGCGG TGCCCGCGCA CGGCACGACG
ACCGCCCGAG CCGCCGCACC CGCCCGCCCG GTCACGCCCG CACGTCCGGC CGTACCCGTC
CGTCCAGCGG CGCCCGCCCG CCAGGGCGCC CCCGCCCAAC CGCCGGCGCC CCCGCGCCCC
GCCGAACCCG TGCACACCGC GGCGTCCGCG CACCCCGCCG CGCCCCCGAA CACCGAGGTA
CCCGCCCGCC CGGACACGCC CGCACCCCCT GTGGCTTCCG CCCGCCCGGC CACGTCCGCG
CCCCCCACGG GGCCTGCCCG CCCGGCTGCT CCCACCCGTC CGGCGGTACC CGCACGCCCG
GCTACGCACC CCGCCCGGAC CGTCCGCCCG CCCGGGACCA CCACCGACCC GGAGGAAGCG
GGGGCCGGGG CCGCCGGAGC ACCGACCACA GACCACGGAC GCGCGGAACA GCACTCCGCG
ACCACCGAGC CGGAGCAGAG CATGCACGCA CACGAACCAT CCGAGCCCCT GCCCGGGCCC
GCCGGGCCTC CTGTCCAGAC CGCCCCCGAG CCCGCGGCCG CGTCCACCGC CCAGGCTCCC
GAGCGGGCCG GCAACGGCTC CGTCCACGCC TACGGCGAGG CCGAGCGCGC CGCCGTCTAC
CGGGCCATCC GCGAACGCCG CGACGTCCGG ACGGGCTTTC GGCCCGACCC CGTGCCCCAC
GACGTGCTCA TCCGCGTCCT GGAGGCCGCC CACCAGGCCC CAAGCGTCGG CGACTCCCAG
CCCTGGGACT TCCTGGTCAT CGAGGACCCC GGCCTGCGCG CCCGCGTGGG CGACCTCGCC
GCGGCCGAGC GCGAGGACCA CGCCCACGCA CCGCCGGGCG TCCGCGCCCG CGCCTTCGCC
GGACTCAAGG CCGAGGCGGT CCTCGACGCG CCCCTCAACA TCGCCGTCAC CGTCGACCCC
ACACGGGGAG GACGGCACGC CCGGGGCCGC CACGCCCGCC CCCTGAGCGC CGACCACGCC
GCGGCGCTCG CCGTGGAGAA CCTCTGGATC GCCGCGCGCG CCGAGGGGCT GGGCGTCGGC
TGGCTCACCT TCGTCGACGA GCGCGACGTC GCCCGCGCCC TCGAACTCCC CGCCCACCTG
GACGTGGCCG CCTACCTGTG CGTCGGCTAC GTGGAGGAGT TCCCCGCCGA GTCCGAGCTC
AGCCTCTCCG GCTGGGCCAG GGAGCGCCCC CTGTCCTGGG CGGTGCACCA CGACCGCTAC
GGCCGCCGCG GTCTGCCCGG CCGGGAACCC ACGAGCCTGC TGGAGGAGAC CATCACCGCC
GTCGGAGCGC TGGACACCCG CGCGATGGAG GAGGCCAGGG ACCGCCAGGA CCGGATGACC
AAGCCGCCCG GCTCCCTCGG CTTCCTGGAG GAGGTCTCGG TCCAGCTGGC CGGGATCTCC
GGGCAGTGCC CGCCGCCGAT CCCCGACCCG GCCGCCGTCG CCGTGTTCGC GGGCGACCAC
GGCGTGCACG CCCAGGGGGT GACCCACTGG CCCCAGGAGG TCACCGCCCA GATGGTGCAC
AACTTCCTGG AGGGCGGCGC CGTCGTCAAC GCCTTCGCCG CCCAGGTCGG CGCCGAGGTC
ACCGTCGTGG ACGTCGGCGT GGCCGCGGAC CTGCCCCGTG CCCCCGGCCT GCTGGCCCGC
AAGGTCGCGC GCGGCACCGC CGACCTCACC CAGGGGCCAG CGCTCACCCG CGAGCAGACC
CTCCAGGCCC TGGAGTGCGG CATCGAGGTC GCCCGCGACC TGGTCTCCGC GGGCAACCGC
TGCCTGGTCA CCGGCGACAT GGGCATCGCC AACACCACCC CGGCCGCCGC CCTGGTGTGC
GCCTTCACCG GAGCCGACCC CGCGCACGCC ACGGGACGGG GCACCGGTGT GGACGACGCC
GTGTACGCCC ACAAGGTCGA CGTGGTGCGC CGTGCCCTGG CCGAGCACCC CGTCGACCCG
GCCGACCCCA TCGGCACCCT GGCCGCCCTG GGCGGCCTGG AGCACGCCGC CCTGGCGGGG
TTCGTGCTCG GCGGCGCGGC CCTGCGCGTC CCGGTGCTGC TGGACGGGGT CATCGCCGGA
TCGGCCGCCC TGGCCGCCGC CGCGATCTCC CCGGAGGCCC TCAGCGCCTG CTTCGCCGGG
CACCGCTCCA GCGAGCCCGG GCACAGCCTG GCCCTGGAGC ACCTGGGCCT GCGCCCCCTG
GTCGACCTGG AGATGCGCCT GGGCGAGGGC TCCGGAGCGC TGCTGGCACT GCCGCTGCTC
CAGAGCGCGG CGCGTGTCCT GCACGACGTC GCCACCTTCG ACGACGCGGG CGTCTCCACC
GCCCCCTGA
|
|---|
| Protein sequence | MTRDDREDAR RGEEGGAEPS RWKGGRPASG TGPRLGGLFD GLPESGRGAR AQPPRGSSGT
ANPFRQRPRP PAPADPAPRV PSAPVSPYGA LPLDIPPAPR PEAEPTVELA ADAPSPTGSP
HRPDVIPFRG GERPAGSDAA SPGAVPSPVP GSPESQAGPE WTVPSAESEH PAEPSGPAEP
EPLAEPEPST ALADAAALAR SAVLAKAARP QEAVPAHGTT TARAAAPARP VTPARPAVPV
RPAAPARQGA PAQPPAPPRP AEPVHTAASA HPAAPPNTEV PARPDTPAPP VASARPATSA
PPTGPARPAA PTRPAVPARP ATHPARTVRP PGTTTDPEEA GAGAAGAPTT DHGRAEQHSA
TTEPEQSMHA HEPSEPLPGP AGPPVQTAPE PAAASTAQAP ERAGNGSVHA YGEAERAAVY
RAIRERRDVR TGFRPDPVPH DVLIRVLEAA HQAPSVGDSQ PWDFLVIEDP GLRARVGDLA
AAEREDHAHA PPGVRARAFA GLKAEAVLDA PLNIAVTVDP TRGGRHARGR HARPLSADHA
AALAVENLWI AARAEGLGVG WLTFVDERDV ARALELPAHL DVAAYLCVGY VEEFPAESEL
SLSGWARERP LSWAVHHDRY GRRGLPGREP TSLLEETITA VGALDTRAME EARDRQDRMT
KPPGSLGFLE EVSVQLAGIS GQCPPPIPDP AAVAVFAGDH GVHAQGVTHW PQEVTAQMVH
NFLEGGAVVN AFAAQVGAEV TVVDVGVAAD LPRAPGLLAR KVARGTADLT QGPALTREQT
LQALECGIEV ARDLVSAGNR CLVTGDMGIA NTTPAAALVC AFTGADPAHA TGRGTGVDDA
VYAHKVDVVR RALAEHPVDP ADPIGTLAAL GGLEHAALAG FVLGGAALRV PVLLDGVIAG
SAALAAAAIS PEALSACFAG HRSSEPGHSL ALEHLGLRPL VDLEMRLGEG SGALLALPLL
QSAARVLHDV ATFDDAGVST AP
|
|---|
| |