Gene Ndas_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3416 
Symbol 
ID9247283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4085627 
End bp4087087 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content75% 
IMG OID 
ProductAmidase 
Protein accessionYP_003681327 
Protein GI297562353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.859407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA TCCATGACCT TCCGGCCCAC CGCCTCCTCG CGATGGTCCG CAGTCGTGAG 
CTGTCGCCTA CTGAGATCAC TGAGCACTTC CTGGACCGCA CCGAGAGGTA CGACCACCTC
GTCGGCGCGT ACATTACGGT CACCCCGGAA AAGGCGCTCG AACAAGCCCG TTACGCGCAG
AAGCGGGTGA TGGCCGACAC GCCAGAGACC CTGCCCCCCC TCCTCGGGCT CCCCGTGCCC
GTCAAGGACC TCGACCCGGT CGCCGGGGTC CGCCTCACCC AGGGCTCACC GGTCTTCCGC
GACGCCGTCG CCCCGACCGA CTCGGGCGTG GTCGCCCGGC TGCGCGCCGC GGGCGCGGTC
CTGCCGGGAA AGACCAACAC CCCCGAGTTC GGGTCGAGCT GCTACACCGA GAACGCCGTC
GCCCCGCCCT CCCGCAACCC CTGGAACACC GACCTGTCCC CGGGCGGCTC CAGCGGAGGC
GCCGCGGCGG CCGTCGCCGC CGGACTCGCC CCCGTGGCCC AGGGCAGCGA CGGCGGCGGC
TCGATCCGCA TCCCCGCCAG CGCGTGCGGG CTCTTCGGCC TCAAGCCCAC CCGCGGCCGG
ATCTCCGGCG CACCCCTCAA ACCCGACCTC GCGGGCCTGT CCACCGCCGG ACCCCTCACC
CGAGGCGTCC GCGACGCCGC CCTCCTCCTG GACGCCATGG CCTTCTCCGG ACCGGGCGAC
CACTTCACCG CGCCGCCCCT GCCGCCGGGC GAGACCTTCG CCGACCACGT GGGCCGCGAA
CCCGGACGCC TGCGCATCGG CTGCCACGCC ACCACCGGCT CCGCCCGGAT CCCCGTGCAC
CCCCACGTCC TGGCCGCCCA CGAGGAGGCC GTCCGCCTCC TGGCCGACCT CGGACACGAG
GTGGAGGAGG TCCCCGCCCC CGGGGACGCC CACTTCGGAG GCTCCTTCAT GGCGGACTTC
GGCGTGGTCT GGGCGGCGAT GGCCTCGGCC ACGCCGGTCG CCCCCGCCCG CGAGGCCGAG
CTGAGCCCCC TCAACCAGTG GCTGCGCGAG CGGGCCCGCG CCACGCCCGT GCCCGACTAC
ATCGCCGCCT GCGCCCGCCT CCAGCGCGGC GTCCGCTCCC TGGTCGCCGC GACCGAACCC
CTCGACGCGG TGCTCTCGCC CGTGCTGGCC GCGCCCCCGG TCCCGCTGGG GCACTTCACC
GGCGACGGAC CCGAGGAGGA GTTCCGGCGG ATGACCGCGT TCGCGCCGTT CACCTCGGTC
TACAACGTCT CGGGACAGCC CTCGGTCAGC GTCCCCCTGC ACTGGTCGCC CGAGGGACTG
CCGATCGGCG TCATGCTCAC CGGCCGCATG GGCGGCGAGG GCACCCTGCT GTCGCTGTCG
GCGCAGCTCG AACGCGCGCG CCCGTGGGCC CACCGCGTCC CGCCGCTGCG CGCCGGCCGA
CCGGACTCGT CACCGGTGTG A
 
Protein sequence
MTQIHDLPAH RLLAMVRSRE LSPTEITEHF LDRTERYDHL VGAYITVTPE KALEQARYAQ 
KRVMADTPET LPPLLGLPVP VKDLDPVAGV RLTQGSPVFR DAVAPTDSGV VARLRAAGAV
LPGKTNTPEF GSSCYTENAV APPSRNPWNT DLSPGGSSGG AAAAVAAGLA PVAQGSDGGG
SIRIPASACG LFGLKPTRGR ISGAPLKPDL AGLSTAGPLT RGVRDAALLL DAMAFSGPGD
HFTAPPLPPG ETFADHVGRE PGRLRIGCHA TTGSARIPVH PHVLAAHEEA VRLLADLGHE
VEEVPAPGDA HFGGSFMADF GVVWAAMASA TPVAPAREAE LSPLNQWLRE RARATPVPDY
IAACARLQRG VRSLVAATEP LDAVLSPVLA APPVPLGHFT GDGPEEEFRR MTAFAPFTSV
YNVSGQPSVS VPLHWSPEGL PIGVMLTGRM GGEGTLLSLS AQLERARPWA HRVPPLRAGR
PDSSPV