Gene Ndas_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3398 
Symbol 
ID9247263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4063699 
End bp4064358 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID 
ProductEndopeptidase Clp 
Protein accessionYP_003681309 
Protein GI297562335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TCAACCCCAG TCTCATCGGC GGCGCGGCCT CGATGGCCCC CCAGGGTCGC 
TACGTCCTGC CGTCCTACGT GGAGCGGACG TCCTACGGCG TCAAGGAGAT GAATCCGTAC 
AACAAGCTCT TCGAGGAGCG GATCATCTTC GTCGGCGTCC AGATCGACGA CACGTCGGCC 
AACGACCTGA TGGCCCAGCT CATCACCCTG GAGCAGCTCG ACTCCGAGCG GGACATCCAG 
ATGTACATCA ACTCGCCGGG AGGCTCCTTC ACCTCCCTCA TGGCGATCTA CGACACGATG 
CAGTTCGTCC GCCCCGACAT CCAGACGGTG TGCATCGGCC AGGCCGCCTC GGCCGCCGCG 
ATCCTGCTCG CGGGCGGGAC GGAGGGCAAG CGCGGCGCGC TGCCCAACGC CCGCATCCTG 
ATCCACCAGC CCGCGACCGA GGGCATGCAC GGCCAGGCCA GCGACATCGA GATCCAGGCG 
AACGAGATCA CCCGTATCCG TACGCAGCTG GAGACCACCC TGGCCCGCCA CACCGGGCGC 
TCCGTCGAGC AGGTCTCCAA GGACATCGAG CGGGACAAGA TCCTGACCGC CGAGGAGGCC 
AAGGACTACG GCATCATCGA CTTCGTGCTG CCCTACCGCA AGGCCTCCCT GAAGTCCTGA
 
Protein sequence
MTEFNPSLIG GAASMAPQGR YVLPSYVERT SYGVKEMNPY NKLFEERIIF VGVQIDDTSA 
NDLMAQLITL EQLDSERDIQ MYINSPGGSF TSLMAIYDTM QFVRPDIQTV CIGQAASAAA 
ILLAGGTEGK RGALPNARIL IHQPATEGMH GQASDIEIQA NEITRIRTQL ETTLARHTGR 
SVEQVSKDIE RDKILTAEEA KDYGIIDFVL PYRKASLKS