Gene Ndas_3395 details

Gene Information

• Locus tag: Ndas_3395
• ID: 9247260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: -
• Start bp: 4059510
• End bp: 4060886
• Gene Length: 1377 bp
• Protein Length: 458 aa
• Translation table: 11
• GC content: 70%
• Product: secreted protein
• Protein accession: YP_003681306
• Protein GI: 297562332

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.201979
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.899466
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGTGTCGG AGACGCGAAG GCCCGCGAAC GGACTGCGGT GGGGGACGCT CGGAACGGCA 
CCCCTCCTGG TCACCGCCCT CCTGGCCGTT CCCGGGGCCA GGGCCGACGG GGTGAGCACC 
GGCGGGGGCG TCGTGCACGT GGCCAACCTG CCCAGGCCGG AGGGGCTGGA CGGCACCGCG 
TCCTACAACT CCGACCTGGC GTTCAGCGGC GACTACGCGA TCGGCGGCAA CTACGACGGC 
TTCGTCGTCT ACGACATCTC CGATCCGGAG AACCCGAGCC GGGTCTCCAC GGTCGTGTGC 
CCCGGGAGTC AGGGCGACGT GTCGGTCAGC GGCGACCTGC TCTACCTCTC GGTGGACTAC 
CCGCGCGCCA GCAGCGAGTG CGGCGCGCCC TCGGTGTCGG CCACCGACCC GGACGGCTTC 
GAGGGGATCC GGATCTTCGA CATCTCCGAC AAGGCCAACC CGCAGTACGT GTCGGCGGTG 
CGCACCGACT GCGGTTCGCA CACCAACACG CTGGTGCCGG GCGAGGACGG TGAGCGCGAC 
TACGTGTACG TCTCCTCGTA CTCGCCCTCG AAGGACTTTC CCAACTGCCA GCCGCCGCAC 
GACAGGATCT CCGTCGTCGA GGTTCCGCTG GCGGACCCGG CCTCGGCCCG GGTGGTCAGC 
GAACCGGTGC TGCTGCCGGA CGGCGGCCAC GGGACCACCA CCGGCTGCCA CGACATCACC 
GCCTACCCCG AGCGGAACCT GGCCGCGGCG GCCTGCCTGG GGGACGGACT GCTGCTCGAC 
ATCTCCGACC CGGTGAACCC GGTCGTCACC GAGGCGGTCC AGGACGAGAA CTTCGCGTTC 
TGGCACTCGG CGACCTTCAC CAACGACGCC CGCACCGTGG TCTTCACCGA CGAGCTCGGC 
GGCGGGCACG CGGCCACCTG CGACGCCGGG ACGGGGCCCG AACGGGGAGC CAACGCGGTC 
TACTCTCTGG ACCAGAGCGG GGCGGAACCG AAGCTCGAAT TTCGGAGCTA CTACAAACTG 
CCTCGTCATC AGGCCGAAAC TGAGAACTGT GTGGCGCACA ACGGCTCGCT GATCCCGGTG 
CCCGGCCAGG ACTACTTCGT GCAGTCCTGG TACCAGGGCG GCGTCTCGGT GATCGACCTC 
AACGACCCGG CCGACCCCCG GGAGATCGGC CACTTCGACC GCGGACCCTG GAACCCCGAC 
GCCCTGACGA CGGCGGGCTC GTGGTCGGCC TACTACTACA ACGGCTACGT CTACTCCTCC 
GACATCAGGC GCGGGCTCGA CGTGCTCCGG CTGACCGACT CCCGCCTGGC GGGGGCCGAG 
GAGGTGCGGA TGGAGGAGTT CAACCCGCAG TCGCAGCCGT CCACGCCCTC CGGCTGA 

 

Protein sequence

MVSETRRPAN GLRWGTLGTA PLLVTALLAV PGARADGVST GGGVVHVANL PRPEGLDGTA 
SYNSDLAFSG DYAIGGNYDG FVVYDISDPE NPSRVSTVVC PGSQGDVSVS GDLLYLSVDY 
PRASSECGAP SVSATDPDGF EGIRIFDISD KANPQYVSAV RTDCGSHTNT LVPGEDGERD 
YVYVSSYSPS KDFPNCQPPH DRISVVEVPL ADPASARVVS EPVLLPDGGH GTTTGCHDIT 
AYPERNLAAA ACLGDGLLLD ISDPVNPVVT EAVQDENFAF WHSATFTNDA RTVVFTDELG 
GGHAATCDAG TGPERGANAV YSLDQSGAEP KLEFRSYYKL PRHQAETENC VAHNGSLIPV 
PGQDYFVQSW YQGGVSVIDL NDPADPREIG HFDRGPWNPD ALTTAGSWSA YYYNGYVYSS 
DIRRGLDVLR LTDSRLAGAE EVRMEEFNPQ SQPSTPSG