Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3383 |
Symbol | |
ID | 9247248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4043852 |
End bp | 4045789 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Radical SAM domain protein |
Protein accession | YP_003681294 |
Protein GI | 297562320 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.660882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCG AAAGCCTCTT CCCGCGGCTG GAACCCCTGC TGACGCAGGT GGCCAAGCCC ATCCAGTACG TCGGTGGCGA GCTCAACTCC GTGGTCAAGG AATGGGACGA GACCCGGGTG CGCTGGGCGC TGATGTACCC GGACGCCTAC GAGGTGGGAG TGCCCAACCA GGGCGTCCAG ATCCTGTACG AGGTCCTCAA CGAGCGCGAG GGCGTGCTGG CCGAGCGCGC CTACGCGGTG TGGCCGGACC TGGAGAAGCT GATGCGCGAG CACGGCGTGC CCCACTTCAC CGTGGACTCG CACCGGCCGC TGGCCGCCTT CGACGTGCTC GGGCTGAGCT TCGCCAGCGA GATGGGCTAC ACCAACATGC TCACCGCGCT GGACCTGGCG GGCATCCCGC TGCGCGCGGC CGACCGCACC GCCGACCACC CGGTCGTGCT GGCCGGCGGA CACTCGGCGT TCAACCCCGA GCCGATCGCC GACTTCCTGG ACGCGGTGGT CCTGGGCGAC GGCGAGGAGA TCACCCTCGC CATCACCGAG ATCATCCGCG AGTTCAAGGA GGAGGGCGAG CCCGGCGGGC GCGACGGCCT GCTGCTGCGC CTGGCCGCGA CCGGGGGCGT GTACGTGCCC CGCTTCTTCG ACGTGGCCTA CCACGAGGAC GGGCGGATCG CCTCCTACAC GCCCAACCGG CCCGGGGTGC CCGGCACGGT GCAGAAGCAC ACCGTGATGG ACCTGGACCA GTGGCCCTAC CCCAAGAAGC CGATCGTGCC GACCGCCGAG TCCGTGCACG AGCGCTACAG CGTGGAGATC TTCCGCGGCT GCACGCGCGG CTGCCGGTTC TGCCAGGCGG GGATGATCAC CCGGCCGGTG CGCGAGCGCA ACAAGGAGAC CGTCACGAAG ATGGTCGAGG ACGGCGTCGA GGCCTCCGGC TTCCAGGAGG TGGGGCTGCT GTCGCTGTCC AGCGCCGACC ACAGCGAGAT CGGGCAGATC GCCAAGGGGC TCGCCGACCG CTACGAGGGC ACCAACACCG GCCTGTCCCT GCCCTCCACC CGCGTGGACG CGTTCAACAT CGACCTGGCC AACGAGCTGA CCCGCAACGG GCGCCGCTCC GGCCTGACGT TCGCGCCGGA GGGCGGCAGC GAGCGGATGC GCCGGGTGAT CAACAAGATG GTCACCGAGG AGGACCTCAT CCGCACCGTC ACCGCCGCGT ACGCGGCCGG GTGGCGGCAG GTGAAGCTGT ACTTCATGTG CGGCCTGCCC ACCGAGGAGG ACGAGGACGT CCTGGCCATC GCCGACCTGG CCACCGAGGT GATCCGGACC GGCCGTGAGG TGACCGGCCG CAAGGACATC CGCTGCACGG TGTCCATCGG CGGGTTCGTG CCCAAGCCGC AGACCCCGTT CCAGTGGGCG GCGCAGACCT CGCACGAGGC CGTCGACGCC CGGCTGCGCA AGCTGCGCGA CAGGCTGCGG GGCGACCGCA AGTACGGCAA GTCGATCGGT CTGCGCTACC ACGAGGGCCG CCCCTCCATC ATCGAGGGCC TGCTCTCCCG GGGGGACCGC AGGGTCGGCC GGGTGGTCGA GGAGGTGTGG CGCTCGGGGG GCCGCTTCGA CGGCTGGAGC GAGCACTTCT CCTACGACCG GTGGTCCGAG GCCGCCGAGG CCGCCCTGGC CGACCTCCCG GTGGACGTGG ACTGGTTCAC CACCCGCGAG CGCGACGAGG ACGAGGTCCT GCCCTGGGAC CACCTGGACG CGGGCCTGGA CCGGTCGTGG CTGTGGCAGG ACTGGCAGGA CTCGCTGTAC GGCGAGGAGT CGCTGGAGGT GGACGACTGC CGCTGGAACC CCTGCTACGA CTGCGGGGTC TGCCCGAGCA TGGGCACCGA GATCCAGATC AACGCCCCTG CGGAGGGCCG TCCGCTGCTG CCGCTCAACG TGGTCTAG
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Protein sequence | MSVESLFPRL EPLLTQVAKP IQYVGGELNS VVKEWDETRV RWALMYPDAY EVGVPNQGVQ ILYEVLNERE GVLAERAYAV WPDLEKLMRE HGVPHFTVDS HRPLAAFDVL GLSFASEMGY TNMLTALDLA GIPLRAADRT ADHPVVLAGG HSAFNPEPIA DFLDAVVLGD GEEITLAITE IIREFKEEGE PGGRDGLLLR LAATGGVYVP RFFDVAYHED GRIASYTPNR PGVPGTVQKH TVMDLDQWPY PKKPIVPTAE SVHERYSVEI FRGCTRGCRF CQAGMITRPV RERNKETVTK MVEDGVEASG FQEVGLLSLS SADHSEIGQI AKGLADRYEG TNTGLSLPST RVDAFNIDLA NELTRNGRRS GLTFAPEGGS ERMRRVINKM VTEEDLIRTV TAAYAAGWRQ VKLYFMCGLP TEEDEDVLAI ADLATEVIRT GREVTGRKDI RCTVSIGGFV PKPQTPFQWA AQTSHEAVDA RLRKLRDRLR GDRKYGKSIG LRYHEGRPSI IEGLLSRGDR RVGRVVEEVW RSGGRFDGWS EHFSYDRWSE AAEAALADLP VDVDWFTTRE RDEDEVLPWD HLDAGLDRSW LWQDWQDSLY GEESLEVDDC RWNPCYDCGV CPSMGTEIQI NAPAEGRPLL PLNVV
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