Gene Ndas_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3328 
Symbol 
ID9247190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3978967 
End bp3979686 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional repressor, LexA family 
Protein accessionYP_003681240 
Protein GI297562266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGAGG AGAATCCCGG AACCGCAGAC ACCGCCACCG TTCTCGCACC AGCGGAGAAC 
ACGGGCGGGT CCACGCCCGA AGCCCCCAAA CTCACCGCGC GCCAGCAGAG CGTGCTGAAC
TGCATCCAGC GCTATGTCCG GGAGCGGGGT TTCCCCCCGT CGATAAGGGA AATCGGGGAA
GCGGTCGGCC TGTCGAGCCC GTCCAGCGTG GCGCACCAGC TCAAGGTCCT CCAGCGCAAG
GGTTACCTGC ACCGGGACCA GAACCGGCCG CGCGCGGTGG AGCTGCGCAC GCCCGGGCGC
GCCTCGGGGC GGACCCTGGT GCCCGAGGAC ATCGACCTCT CGCGCGCCGC CGCCGTGCCG
CTGGTCGGCC GGATCGCCGC CGGTGGTCCG ATCCTGGCCG AGGAGTCGGT GGAGGACGTG
CTCGCCCTGC CGCGTCAGCT GGTGGGTGAG GGGCGCCTGT TCATGCTCAC CGTGGTCGGC
GACTCGATGA CCGACGCCGC CATCACCGAC GGCGACATGG TGGTGGTGCG CCAGCAGCAG
GACGCCAACA ACGGCGACAT CGTGGCGGCG CTGCTCGACG AGGAGGCGAC CGTCAAGGTA
CTGCGCCGCG AGGAGGGCGG CCACGTGTGG CTGATGCCGC GCAACGAGGC CTACGAGCCG
ATCAACGGCG ACGACGCCAC CATCCTCGGC AAGGTGGTCG CGGTCATGCG CCGCGTCTGA
 
Protein sequence
MPEENPGTAD TATVLAPAEN TGGSTPEAPK LTARQQSVLN CIQRYVRERG FPPSIREIGE 
AVGLSSPSSV AHQLKVLQRK GYLHRDQNRP RAVELRTPGR ASGRTLVPED IDLSRAAAVP
LVGRIAAGGP ILAEESVEDV LALPRQLVGE GRLFMLTVVG DSMTDAAITD GDMVVVRQQQ
DANNGDIVAA LLDEEATVKV LRREEGGHVW LMPRNEAYEP INGDDATILG KVVAVMRRV