| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3316 |
|---|
| Symbol | |
|---|
| ID | 9247178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3961379 |
|---|
| End bp | 3962176 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | protein tyrosine/serine phosphatase |
|---|
| Protein accession | YP_003681228 |
|---|
| Protein GI | 297562254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.367248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.978331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATCG TCACCAAGGT GACGAACGAC GGTTTCCTCC TCTCCAGCGC CCCCAACTTC
CGCGACCTCG GCGGGCACCG CACCGCCTCG GGCCGCACGG TCCGCAGCGG GCTCGTGTAC
CGCTCCGACG CCCTGCACGC GATCGCCGCG GACGAGCTGC CCGTCTACAA CGGCCTGGGC
ATCCGCCAGC TCGTCGACCT GCGCACCCCG CACGAGCGCG AGACCCTCCC CGACGTCGTC
CCCGAGGGCG CCGAGTACGC GGTCGTGGCC GTGCAGGACC CCGAGGCGTC CGGTGCCAAC
TTCTCCCTGG CCCTGGCCGA CCCCGAGAAG GCCCGCCTCA TGTTCGCCGA CGGCGCCGCC
GAGCGCTTCA TGCACGGCGT CTACCGCGAG CTCGTGACCG ACGCCGAGGC GCTCGCCGGG
TATCGCGAGC TGGTCGAGCG GGTGGCCCGG GGCCCGGCGG CCCTGGTCTT CCACTGCAGC
GCGGGCAAGG ACCGCACCGG CTGGGGCGCC GCCCTGCTGC TCGGCCTGCT GGGCGTGGAC
CGCGAGGCCG TGGTCGCCGA CTACCTGGCC AGCAACGAGC GCCAGGCCAA CACCGACGAG
TGGATGCGCA GGCTCGCCCG GCACAGCGCC CTGGAGTGGG AGGAGGTCGT GCCCATGACG
CGGGTGCGCG CCGAGTACCT GGAGACCGCC TTCGCCCACG TGGACGAGGT CCACGGCTCC
TTCGACGCCT ACGTCACCGA GGGCCTCAAG CTCTCCGACG CCACCGTCGA GCAGCTGCGC
GAGCGCATGC TGGAGTAG
|
|---|
| Protein sequence | MGIVTKVTND GFLLSSAPNF RDLGGHRTAS GRTVRSGLVY RSDALHAIAA DELPVYNGLG
IRQLVDLRTP HERETLPDVV PEGAEYAVVA VQDPEASGAN FSLALADPEK ARLMFADGAA
ERFMHGVYRE LVTDAEALAG YRELVERVAR GPAALVFHCS AGKDRTGWGA ALLLGLLGVD
REAVVADYLA SNERQANTDE WMRRLARHSA LEWEEVVPMT RVRAEYLETA FAHVDEVHGS
FDAYVTEGLK LSDATVEQLR ERMLE
|
|---|
| |