Gene Ndas_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3313 
Symbol 
ID9247175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3956599 
End bp3958677 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative PAS/PAC sensor protein 
Protein accessionYP_003681225 
Protein GI297562251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCCG AGACGTCCAT TCCGCCACCC CGGGTCAGCA GGGCGGAACT CCCCGACGCG 
GTCAGATCCC TCCTCACCGA CTCCCCGATC GGATTCGCGC TGCTCGGCCC CGACGACCTC
CTCGGCACGA TCAACCAGCG CCTGGCCGCC GACGTCCTGG GGCGCGCCCC CGCCGAGTGC
CTGGGCCGCG ACCCCGCAGA CCTGCTGGAG GAGAACGGCG ACCGCGACGC GGCCGCCGAC
CACCGGGCCT GCCTGGCCCG GGCGCGCGAG AGCGGACAGG CCGTCCGCGG ACGCCACCGC
GCCCCCGCCG GACAGCTGTG GGACCTGACC TGGTTCCCCG TCACCGAACC GGACACGGAC
GACGAGTACG TCGCCCTCAT CGCGGTCCCC GCCGGTGAGG GCGCCGAACC CGTCGACGGC
GCCGCGCTGC GCCGCGACGA GCAGCGGCTG CGCGCCCTGT TCCAGGCGGG CAACCAGATC
GTCTGGGCCG CCGGACCCGG CGGCGAGATC CGCGAGGACT GCCCCCAGTG GCGGGCCGTC
ACCGGTCAGG AGCTGGAGCA CTACCTGGGC CGGGGCTGGC TCGACGCCCT CCACCCCGAG
GACCGTCCCC GCGTCGAGCG CGCCTGGGAG GACTCCGTCC TCGACGTCAC CCCCTTCGAC
GCCATGTTCC GCGTGCGGAC CCGCTCGGGC GGCTACGGCC ACTACCGGGC CAGGGCCCAC
CCGGTCATGG AGGGGACACG GACCGCCGAG TGGGTCGGCA CCCTCGCCGA CATCACCAAC
GAGCGCGAGG CCGACGAACT CCGCCAGCGC CTCAACCAGC AGCTCAGCGA GGCGGCCATG
CGCACCGCCC GCCTCCAGAA GGCCACCTCC GACCTGGCCG AGGCGCTCAC CGCCGACGAG
GTCGTCAACG CCATGTCCGA GATCGGCCGC TCCGGGGTGG GCGCCGACCA CACCTGCGTC
GTCCTGCTGG ACCGCGACCG CCTGCGGCTG CGCACCATCG CCGCCGCGCA CGCCCACCAG
CTGCCCCGCT CCACCTTCCC CACGGACCAC CCCGACATCG CCGCCCTGGC GGTGGCCGAC
CGGCTGCCCC GCCTGGCCGC CAACCCGGCC GAGCTGGGCG CGCTGTTCGA CGGCGCGCCC
GAGGTGGACG AACTCGTCGG GTCCACGCCC GAGCGGGCCT GGATCGCGCT GCCGATGATG
ACCGCGGGGC GCCCCATCGG CGCGCTGCGC TTCGCCTTCT CCACCCCGCG CGAGGTCTCC
GACGACGAAC GCGTGTTCCT GGAGGCCCTG GCCGGACAGT GCGCGCTGGC CATCGGCCGC
GCCACCCTCT ACGAGCAGGA GCACAACACC GCCGAGGAGC TCCAGCGCAG CCTGCTGCCC
GAGGAACTGC CCGAGGTGCG CGGCGTGCGC CTGGCCGCCT ACTACCGGTC CGGGTCGCAG
AACGTGCAGG TCGGCGGCGA CTGGTACGAC GCCTTCCCGC TGCCCGACGG CCGCGTCGCC
GGGGTGCTCG GCGACGTCAT GGGCAAGGGC ATCCCGGCCG CGGCAGGGAT GAGCCGCATC
CGCAACGCGC TGCGCGCCCT GGCCTTCTCC ATGCCCGAGC CCGCCGACGT CCTGGCCGGC
CTGGACCGCA TGTTCTCGGC CACGGAGGGT ATGGACCAGG TCACCACACT GGTCTACTTC
GTGCTCGACC CCGTCACCGG ACAGCTCGAC CTCAGCAACG CGGGACACCT CCCGCCGCTG
GTCGTGGCGG GCGGCGCGCG GCCGTCGCTG CTCGACACCG AACCCGACAC GCCGCTCGGG
GTCAGCTCCC CGCGGGGTCA CCACAAATTC TTCGTCCAAC CCGGTAACAC CGTCGCCCTG
TACTCCGATG GACTGGTTGA GAACCGCAAA CGGTCCGTCT ACTCCGGACT CGACGAGCTC
GTCCACGTGG CGTCCTCGGC CCCTCCGGAG GTGGTGGGCG ATCCACAGCA GATGCTGGAG
TACCTTGTTG AGAGCATGCT CGATGGGTAT GAGCAGGACG ACGACGTCAC GCTGCTCGCC
GTCCAGCTTC CGGTGATCGA CTCCGTGCCG GAGCGGTAG
 
Protein sequence
MSAETSIPPP RVSRAELPDA VRSLLTDSPI GFALLGPDDL LGTINQRLAA DVLGRAPAEC 
LGRDPADLLE ENGDRDAAAD HRACLARARE SGQAVRGRHR APAGQLWDLT WFPVTEPDTD
DEYVALIAVP AGEGAEPVDG AALRRDEQRL RALFQAGNQI VWAAGPGGEI REDCPQWRAV
TGQELEHYLG RGWLDALHPE DRPRVERAWE DSVLDVTPFD AMFRVRTRSG GYGHYRARAH
PVMEGTRTAE WVGTLADITN EREADELRQR LNQQLSEAAM RTARLQKATS DLAEALTADE
VVNAMSEIGR SGVGADHTCV VLLDRDRLRL RTIAAAHAHQ LPRSTFPTDH PDIAALAVAD
RLPRLAANPA ELGALFDGAP EVDELVGSTP ERAWIALPMM TAGRPIGALR FAFSTPREVS
DDERVFLEAL AGQCALAIGR ATLYEQEHNT AEELQRSLLP EELPEVRGVR LAAYYRSGSQ
NVQVGGDWYD AFPLPDGRVA GVLGDVMGKG IPAAAGMSRI RNALRALAFS MPEPADVLAG
LDRMFSATEG MDQVTTLVYF VLDPVTGQLD LSNAGHLPPL VVAGGARPSL LDTEPDTPLG
VSSPRGHHKF FVQPGNTVAL YSDGLVENRK RSVYSGLDEL VHVASSAPPE VVGDPQQMLE
YLVESMLDGY EQDDDVTLLA VQLPVIDSVP ER