| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3312 |
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| Symbol | |
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| ID | 9247174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 3954517 |
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| End bp | 3956232 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_003681224 |
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| Protein GI | 297562250 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCATCTG CCAGTTCGAC TCGCTCGAAG CAGTCCGAGT CACTGCAAGA GCCCGTCATT
CAGCAGCTGA TCGAGCGTGG GCGGTCCCAG GGCTTCCTTG AGCCCGAGGA CGTGCGCCGT
GCCTTCGAAG AGGCCGAAAT CCCGATGTCG CAGGCGCAGT CCGTGCTCCG CAGCCTCGCG
AAGGAGGGCG TGACCGTACT CGTTCCCGAG TCGGCCTCCT CCCGGCGCAA GGCGCCGCGG
CGCAAGGCGG CGACCACCAA GACGGCGGCC ACGCGGTCCA CCTCGACCAG GTCCACCAAG
ACCACCGCGA CGAGCAGGGC CGCCAAGCCC GTGCGCGCGG CGGCGGCCCA GGAGCAGACC
GAGACGGTCA CCGCCGTGGT CGGTTCCGCC GAGGACGCCG GGAACGAGGC CGGGGCGGAG
AAGAAGCCCG CGGCCAAGAA GCCCGCCAAG AAGACGGCGA CCAAGAAGCC CGCGACCAAG
GCGGCCAAGA CCACCGCGGC CAAGGGCCCG ACCGCCAAGA CCACCGGCCT CAAGGCCGCC
GCCGCCAAGA AGACGGCGAC CAAGGAACTC GGACTCGCGG CGGACGGCGA GTTCGACGAG
GACGAGGACG GCCTGGACGA CCTCGAGCAC ACCGGCGCCG AGCTGGAGCT GGTCGAGGAC
ACCCCGGACC CGGCGGACAA GGACCTCAAG CCCGCCAAGC CCGAGGCCGT GGGCGCCCCG
GCCAAGCCCG CCAACGAGGA CGAGTCCTTC GTCCTCTACG ACGACGATGA CGACGCCCCC
GCGGCGCAGG TCGTGGCCGC GGGCGCGACG GCGGACCCGG TCAAGGACTA CCTCAAGCAG
ATCGGCAAGG TCCCGCTGCT CAACGCCGAG CAGGAGGTCG AACTCGCCAA GCGGATCGAG
GCCGGCCTGT TCGCCGAGGA GAAGCTGGCC GAGGAGGCCG AGCTCCTCAC CGTCGAGCTG
CGCGACGAGC TGGAGTGGAT CGCCGAGGAC GGCGGCCGCG CCAAGAAGCA CCTGCTGGAG
GCCAACCTCC GGCTCGTGGT CTCGCTCGCC AAGCGCTACA CCGGCCGCGG CATGCTCTTC
CTGGACCTGA TCCAGGAGGG CAACCTCGGT CTGATCCGCG CGGTGGAGAA GTTCGACTAC
ACCAAGGGCT TCAAGTTCTC GACCTACGCC ACGTGGTGGA TCCGCCAGGC GATCACCCGG
GCCATGGCCG ACCAGGCGCG CACCATCCGC ATCCCGGTGC ACATGGTCGA GGTCATCAAC
AAGCTGGCCC GCGTCCAGCG CCAGATGCTC CAGGACCTGG GCCGCGAGCC CACCCCGGAG
GAGCTGGCCA GGGAACTCGA CATGACCCCG GAGAAGGTCG TCGAGGTGCA GAAGTACGGC
CGCGAGCCGA TCTCCCTGCA CACCCCGCTG GGCGAGGACG GCGACAGCGA GTTCGGCGAC
CTCATCGAGG ACTCCGAGGC GATCCAGCCG GGCGAGGCGG TCAGCTTCAC CCTGCTCCAG
GAGCAGCTGC ACTCGGTGCT GGACACGCTG TCCGAGCGCG AGGCGGGCGT GGTGTCCATG
CGCTTCGGTC TCACCGACGG CCAGCCGAAG ACTTTAGACG AGATCGGCAA GGTCTACGGG
GTCACCCGTG AGCGCATCCG GCAGATCGAG AGCAAGACGA TGTCGAAGCT CCGCCACCCG
TCGCGTTCGC AGGTGCTCCG CGACTACCTG GACTAG
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| Protein sequence | MSSASSTRSK QSESLQEPVI QQLIERGRSQ GFLEPEDVRR AFEEAEIPMS QAQSVLRSLA
KEGVTVLVPE SASSRRKAPR RKAATTKTAA TRSTSTRSTK TTATSRAAKP VRAAAAQEQT
ETVTAVVGSA EDAGNEAGAE KKPAAKKPAK KTATKKPATK AAKTTAAKGP TAKTTGLKAA
AAKKTATKEL GLAADGEFDE DEDGLDDLEH TGAELELVED TPDPADKDLK PAKPEAVGAP
AKPANEDESF VLYDDDDDAP AAQVVAAGAT ADPVKDYLKQ IGKVPLLNAE QEVELAKRIE
AGLFAEEKLA EEAELLTVEL RDELEWIAED GGRAKKHLLE ANLRLVVSLA KRYTGRGMLF
LDLIQEGNLG LIRAVEKFDY TKGFKFSTYA TWWIRQAITR AMADQARTIR IPVHMVEVIN
KLARVQRQML QDLGREPTPE ELARELDMTP EKVVEVQKYG REPISLHTPL GEDGDSEFGD
LIEDSEAIQP GEAVSFTLLQ EQLHSVLDTL SEREAGVVSM RFGLTDGQPK TLDEIGKVYG
VTRERIRQIE SKTMSKLRHP SRSQVLRDYL D
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