Gene Ndas_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3293 
Symbol 
ID9247155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3928196 
End bp3928936 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content74% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003681205 
Protein GI297562231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGACC AGTCGCACGA GGACATCCAT GACACCCAGG CACCTCCTCA AACCGTACTT 
TCGACCTTTT CCGGGGAGGA AGCACCCCCA CCTTTGCCGG TTCCGGCCAC AACCGGCGGT
GATACAGCCG GGCCCAATCC GGACGGGAAC CCCGGCGAAA CCGACGCCGC CGCCCCCAGC
GACGCCGAGC TCGTACGGGC CGCCTGCCGG GGTGAGCACA GGGCGTGGGA GGCCATCGTG
GACCGGCACC TGCCGGTCGT GAACGCGATC GCGCGCTCCT ACCGCCTGTC CGTCCCGGAC
CGGGAGGACG CGGTGCAGAC GGTGTGGCTC ACCCTCAACC AGCAGCTGCC CCGCCTGCAC
TCCCCCGAGC GGCTCCGCGG CTGGCTGCGC AGGGTCGCCC ACGACGCCTG CGGCCGACAG
CGCCGCCACA GCGCCCGGGA CCAGCCGGTC GACCCCCGGA GCCTCACCCG GCGGGACCCC
CTCTCGGAGG ACTCGGGTCC CGAGGCGCAG TACCTGCGCA AGGAGGAGCA CGAGGAGCTG
CACCGCGCGA TCCGGCGGCT CACCGACCCC GGAGAGCGGC GGGCCGCCCT GCGCTACCTC
GACGGGGCCG CGGGGCTGCC CGTGCCCCCG GCCCCGTGCG ACCCGGGGTC CTCCGACGAC
CAGGTCCACC CCCGGACCGC CGCGAACCAG CGCCGCCGTA TGCTCCGCAG ACTCCGCCGC
CTCCTGGAGG AACCCACATG A
 
Protein sequence
MPDQSHEDIH DTQAPPQTVL STFSGEEAPP PLPVPATTGG DTAGPNPDGN PGETDAAAPS 
DAELVRAACR GEHRAWEAIV DRHLPVVNAI ARSYRLSVPD REDAVQTVWL TLNQQLPRLH
SPERLRGWLR RVAHDACGRQ RRHSARDQPV DPRSLTRRDP LSEDSGPEAQ YLRKEEHEEL
HRAIRRLTDP GERRAALRYL DGAAGLPVPP APCDPGSSDD QVHPRTAANQ RRRMLRRLRR
LLEEPT