Gene Ndas_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3288 
Symbol 
ID9247150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp3924077 
End bp3924607 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPEBP family protein 
Protein accessionYP_003681200 
Protein GI297562226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0439012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACGC CACCCTCCCC CTACGACTTC CTGCCCCAGG TCGCGTCGTT CACCGTCACC 
AGCAACGACG TCGCCGACGG ACAGACCCTG CCCCGGGCCC AGGTCAGCGG GATCATGGGC 
GCCGGAGGCG GGGACGTCTC GCCGCACCTG TCCTGGAGCG GTTTCCCCGA GGGGACGCGC 
AGCTTCGCCG TCACCTGCTT CGACCCGGAC GCACCCACCG CCAGCGGCTT CTGGCACTGG 
TCGGTGGCCA ACATCCCGGC CGACGTCACC GAGCTGGCCG CGGGCGCGGG GGACGGCTCC 
GGCCTCCCCG AGTCGGCCGT CACCCTGCGC AACGACGCGG GCGGACACCG CTACGTCGGC 
GCGGCGCCGC CCGCCGGGCA CGGCCCGCAC CGGTACTTCT TCGTGGTGCA CGCGGTGGAC 
GTGCCCCGCC TGGAGGTGGA CGCGTCGGCC AGCCCGGCCT TCCTCGGCTT CAACCTGTTC 
TCGCACGCGC TGGGCCGTGC GATGGTCACC CCCGTCTACG AGGTGGAGTA G
 
Protein sequence
MATPPSPYDF LPQVASFTVT SNDVADGQTL PRAQVSGIMG AGGGDVSPHL SWSGFPEGTR 
SFAVTCFDPD APTASGFWHW SVANIPADVT ELAAGAGDGS GLPESAVTLR NDAGGHRYVG 
AAPPAGHGPH RYFFVVHAVD VPRLEVDASA SPAFLGFNLF SHALGRAMVT PVYEVE