Gene Ndas_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3278 
Symbol 
ID9247140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3913802 
End bp3915013 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content71% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003681190 
Protein GI297562216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCA CCGACGCACG TGTCGTCGTG TCCTCACCCG GCCGCAACTA CGTCACCCTG 
GTGGTCGAGA CCGAGGACGG CGTCACCGGC ATCGGCGACG CCACGCTCAA CGGCCGCGAA
CTCGCGGTCG CCTCCTACCT GCGCGACCAC GTGTGCCCGC TGCTCGTCGG ACGCGACGCG
CGGCGGATCG AGGACACCTG GCAGTACCTG TACAAGGGCG CCTACTGGCG CCGCGGCCCG
GTGACGATGA CCGCGATCGC CGCCGTGGAC GTGGCGCTGT GGGACATCAA GGGCAAGGCC
GCGGGCATGC CCCTCTACCA GCTCCTGGGC GGGGCCTCTC GTGAGGGCGT CCTGGTCTAC
GGGCACGCCA GCGGCACGTC GCTGGACGGG CTCTCCGAGG ACTTCCAGCG CCACCTGGAC
CTGGGCTACC GGGCGATCCG GGTCCAGGCC GCGGTCCCCG GGCTGGAGAA GACCTACGGG
ATCGCCCCGG CGGACGGCCG GGTGTACGAG CCCGCCAGCG GCAACCGGCC CCAGGAGGAC
ACCTGGGACA CCCCGGCCTA CCTGGACTTC GCGCCGGCCA TGATCGCCCA CGTCCGTGAG
CAGTTCGGCT ACGGCGTGCA CCTGCTGCAC GACGTGCACC ACCGGCTCAC CCCGATCGAG
GCGGGCCGCC TGGGCGCGGC GCTGGAACCG TACCGGCTGT TCTGGATGGA GGACCCGACC
CCGGCCGAGG ACCAGTCCGC GTTCCGGATC CTGCGCCAGC ACACCACCAC CCCCGTGGCG
GTGGGCGAGG TGTTCAACTC GATCTGGGAC TGCCAGCAGC TCATCACCGA GCGGCTCATC
GACTACGTCC GCGCCTCGGT GTCGCACACC GGCGGCATCA CCCACCTGCG CCGCGTGTTC
TCGCTCGCGG AGCTGTACGG GGTGCGCTCG GGCTCGCACG GCGCCGGTGA CCTGTCGCCG
GTCGCCATGG CCGCGGCGCT CCACCTCGAC CTGGCCATCC CCAACTTCGG CATCCAGGAG
CACATGGGCC ACACCGGCCC ATACGCGGAG GTCTTCCGCA CCTCCTACTC CTTCTCGGAC
GGGTACATGC ACCCCGGAGA CGCCCCGGGC CTGGGCGTGG AGTTCGACGA GGAGGCCGCG
GCCCGCCACC CCTACGAACC CAGGTACCTG CCGGTCAACC GGCGGCTCGA CGGAACGGTG
CACGACTGGT GA
 
Protein sequence
MKITDARVVV SSPGRNYVTL VVETEDGVTG IGDATLNGRE LAVASYLRDH VCPLLVGRDA 
RRIEDTWQYL YKGAYWRRGP VTMTAIAAVD VALWDIKGKA AGMPLYQLLG GASREGVLVY
GHASGTSLDG LSEDFQRHLD LGYRAIRVQA AVPGLEKTYG IAPADGRVYE PASGNRPQED
TWDTPAYLDF APAMIAHVRE QFGYGVHLLH DVHHRLTPIE AGRLGAALEP YRLFWMEDPT
PAEDQSAFRI LRQHTTTPVA VGEVFNSIWD CQQLITERLI DYVRASVSHT GGITHLRRVF
SLAELYGVRS GSHGAGDLSP VAMAAALHLD LAIPNFGIQE HMGHTGPYAE VFRTSYSFSD
GYMHPGDAPG LGVEFDEEAA ARHPYEPRYL PVNRRLDGTV HDW