Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3275 |
Symbol | |
ID | 9247137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3910461 |
End bp | 3911189 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003681187 |
Protein GI | 297562213 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.906073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACC AGACCCGGTC CGGAGGACCC CTGCTGTCCG CGCGGGACCG CACCCTGGAC ACCATCCGCC GCGCGATCAT CACCCTGGAG CTCAAGCCGG GCACGCCCCT GTCGGAGAAC GAGCTCGCCA CCGAGCTCGC CGTGAGCCGG ACGCCCGTGC GCGAGAGCCT CATCCTGCTG CGCGAGGAGG GGCTGGTGGA GGTCTACCCC CAGGTCGGCA CGTTCGTCTC ACTCGTGGAC CCCGAGCGCG TCCGGCAGGC GCAGTTCATC CGGGAGGCGG TGGAGTGCAC CTCCCTCGCC CAGGCCCGGC CCCCCTTCTC GGCGGACCAC GTCGGCGATC TGCGCGTCCT GCTCGGCGCG CAGCGGGAGG CGGGCGGCGG CGACCACGAC CGCTTCTTCG AGCTGGACGA GGACTTCCAC CGCTCGCTGC TGGCGCTGGC GGGCAACGAG AGCGCCTGGC GGACGGTGAA CGCGGCCAAG GCCCACCTGG ACCGGGCCCG GCGGCTGAGC CTGATCGACA CGCGCCCGAT CGGGGAGCTG GTGGACCAGC ACACGCTGGT CGTGGACGCG ATCGAGGCCG GGGACACCGG GACCGCCGTG GAGGCCCTGC GCTCCCACCT GCGGGCGGTG TTCGAGGACG TCGGGCGGAT CCGGGCCGCG TCACCGGAGT TCTTCTCGGA CGGGCGGCCC CGCCGTCCCG TCCGCAGGAC CGTGACCTCG CTGAGGTAG
|
Protein sequence | MADQTRSGGP LLSARDRTLD TIRRAIITLE LKPGTPLSEN ELATELAVSR TPVRESLILL REEGLVEVYP QVGTFVSLVD PERVRQAQFI REAVECTSLA QARPPFSADH VGDLRVLLGA QREAGGGDHD RFFELDEDFH RSLLALAGNE SAWRTVNAAK AHLDRARRLS LIDTRPIGEL VDQHTLVVDA IEAGDTGTAV EALRSHLRAV FEDVGRIRAA SPEFFSDGRP RRPVRRTVTS LR
|
| |