Gene Ndas_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3269 
Symbol 
ID9247126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3903545 
End bp3905518 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content69% 
IMG OID 
Productthreonyl-tRNA synthetase 
Protein accessionYP_003681181 
Protein GI297562207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.993987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCCG CGCCTGAGCT GCACATCACC CTCGCCGGAA CCCCGCGTGC GGTGGCGGCG 
AACACTACGG CGGGCCAGGC TCTGGAGGCC GACGGCAGGA CCGTCATCGC GGCGCTGGTC
AACGGCGAAC CGCGCGACCT CGCCCGGGAG CTGCACGAGG GCGACACCGT CGAGCCGATC
GCCATCGACT CCGAGGAGGG GCGGGCGATC CTGCGCCACT CCACCGCGCA CGTGCTGGCC
CAGGCCGTCC AGGAGCTCTT CCCCGAGGCC AAGCTGGGCA TCGGCCCGCC CGTGGAGAAC
GGCTTCTACT ACGACTTCGA CGTCGCCGAG CCCTTCACCC CCGCCGACCT GAAGAGCATC
GAGAAGAAGA TGCAGCAGAT CGTCAAGCAG GGGCAGCGCT TCGACCGCCG CGTCGTCTCG
GACGAGGAGG CCCGCGCCGA GTTGGCCACC GAGCCCTACA AGCTGGAGCT GATCGGGCTC
AAGGGCGGCG CCACCGAGGC CGCCGAGGGC GCCGGTGTGG AGGTGGGCGC CGGTGAGCTC
ACCATCTACG ACAACGTCCA CCCGCGCACC GGCGAGCTGT GCTGGAAGGA CCTGTGCCGC
GGGCCGCACC TGCCCACCAC CCGCGTCATC CCGGCGTTCA AGCTCATGCG CACCGCCGCC
GCCTACTGGC GCGGCAAGGA GACCAACCCG CAGCTGCAGC GCGTCTACGG CACCGCCTGG
GAGAGCAAGG AGGCCCTCAA GGACCACCTG ACCTTCCTGG AGGAGGCGGA GAAGCGCGAC
CACCGCAAGC TCGGCTCCGA GCTGGACCTG TTCTCCATCC CGGACGAGAT CGGCTCGGGC
CTGGCGGTCT TCCACCCCAA GGGCGGCACG GTCCGCCGGG TCATGGAGGA CTACTCGCGG
CGGCGGCACG AGGAGGACGG CTACGAGTTC GTCTACACCC CGCACGCCAC CAAGGGCACC
CTGTTCGAGA AGTCGGGGCA CCTGGACTGG TACGCGGACG GGATGTACCC CCCCATGCAG
CTCGACGGCG GCCAGGACTA CTACCTCAAG CCGATGAACT GCCCGATGCA CCACCTGATC
TTCGACGCGC GCGGGCGCTC CTACCGTGAG CTGCCGCTGC GCCTGTTCGA GTTCGGCACC
GTGTACCGGT ACGAGAAGTC GGGCGTGGTG CACGGCCTGA CCCGCGCCCG CGGCTTCACC
CAGGACGACT CCCACATCTA CTGCACCAAG GAGCAGATGG CGGACGAGCT CGACTCGCTG
CTGACCTTCG TGCTCGACCT GCTGCGCGAC TACGGCCTGG ACGACTTCTA CCTGGAGCTG
TCCACCAAGG ACCCGGAGAA GTACGTCGGT ACCGACGAGG TCTGGGAGGA GGCCACCGAG
ATCCTGCGCG AGGCCGCGCA GAAGCAGGGA CTGGAGCTGG TCCTGGACCC GGCGGGCGCC
GCCTTCTACG GCCCCAAGAT CTCGGTGCAG GCCAAGGACG CCATCGGCCG CACCTGGCAG
ATGTCCACCA TCCAGGTGGA CTTCAACATG CCCGAACGCT TCGACCTGGA GTACACCGCG
GCCGACGGCT CGCGCCAGCG TCCGGTGGTG ATCCACCGCG CCCTGTTCGG CTCCATCGAG
CGCTTCTTCG CCGTCCTGCT GGAGCACTAC GCGGGCGCGT TCCCGGCCTG GCTGGCGCCG
GTGCAGGCGG TCGGCATCCC CATCGCCGAC GAGCACGTGC CCTACCTGCG CGAGCTCGCC
GCCAGGCTGC GCGCGGAGGG CATCCGCGTC GAGGTGGACG CCAGCGACGA CCGCATGCAG
AAGAAGATCC GCAACGCCCA GAAGCAGAAG GTGCCCTTCA TGCTGCTGGC CGGTGACGAG
GACGTCAGCA AGAACGCGGT GTCCTTCCGC TACCGGGACG GCTCGCAGAA CAACGGCGTG
CCGCTGGACG AGGCGGTGGC CGAGATCGTC GCCGCCGTCC GCGAGCGTCG CTGA
 
Protein sequence
MSAAPELHIT LAGTPRAVAA NTTAGQALEA DGRTVIAALV NGEPRDLARE LHEGDTVEPI 
AIDSEEGRAI LRHSTAHVLA QAVQELFPEA KLGIGPPVEN GFYYDFDVAE PFTPADLKSI
EKKMQQIVKQ GQRFDRRVVS DEEARAELAT EPYKLELIGL KGGATEAAEG AGVEVGAGEL
TIYDNVHPRT GELCWKDLCR GPHLPTTRVI PAFKLMRTAA AYWRGKETNP QLQRVYGTAW
ESKEALKDHL TFLEEAEKRD HRKLGSELDL FSIPDEIGSG LAVFHPKGGT VRRVMEDYSR
RRHEEDGYEF VYTPHATKGT LFEKSGHLDW YADGMYPPMQ LDGGQDYYLK PMNCPMHHLI
FDARGRSYRE LPLRLFEFGT VYRYEKSGVV HGLTRARGFT QDDSHIYCTK EQMADELDSL
LTFVLDLLRD YGLDDFYLEL STKDPEKYVG TDEVWEEATE ILREAAQKQG LELVLDPAGA
AFYGPKISVQ AKDAIGRTWQ MSTIQVDFNM PERFDLEYTA ADGSRQRPVV IHRALFGSIE
RFFAVLLEHY AGAFPAWLAP VQAVGIPIAD EHVPYLRELA ARLRAEGIRV EVDASDDRMQ
KKIRNAQKQK VPFMLLAGDE DVSKNAVSFR YRDGSQNNGV PLDEAVAEIV AAVRERR