| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3245 |
|---|
| Symbol | |
|---|
| ID | 9247102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3878645 |
|---|
| End bp | 3880315 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I |
|---|
| Protein accession | YP_003681157 |
|---|
| Protein GI | 297562183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.590925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TCGCCCGGGC CAGACGGTGG ATCGCCCAGG ACCCCGACCC CGACACGCGC
GCGGAGCTGG CGGGACTGGT GGAGCGCGCC GGCCGGGGCG AGGCCGACGC GCTGGCCGAC
CTGGACTCCC GCTTCGGGGC CCGCCTGGAG TTCGGCACCG CCGGACTGCG CGGCGCCCTC
GGCGCGGGCC CCAACCGGAT GAACCGGGTG GTGGTCATGC GAGCCGCCGC GGGGATCGCC
GCCTGGCTCG GCGCGGGCCC CGGGCACGTG GTCGTCGGCT ACGACGCCCG GCACCGCTCG
GCGGACTTCG CCCGCGACAG CGCCGCCGTC CTCACCGGCG CCGGGCACCG CGTGTCCCTC
ATGCCCGGAC CGCTGCCCAC CCCCGTCCTG GCCTTCGCCG TCCGCGACCT GGGCGCCGAC
GCCGGGATCA TGGTCACCGC CAGCCACAAC CCGCCCCGGG ACAACGGTTA CAAGGTCTAC
GCGGGGGCGG CCAAGGCGGG CGGCGCCGCC GACGCGGGAA CCCAGATCGT CTCCCCGGCC
GACGCCGAGA TCTCCGCCGC CATCGACGCG GTGGGCCCGG TCGACGAACT GCCGCTGGGC
GAGGGGTGGA CGGTGCTGGG GGAGGAGGCG GTGGAGCGCT ACCTGGACGC GGTCACCGCG
CTGGTCCCGG GCGGGGACCG CGACCTGGCC ACCACCTACA CCGCCATGCA CGGGGTGGGC
GGCCGGGTGC TGCTGGCGGC GATGGAGCGG GCCGGGTTCC CCCGCCCGTC CGTGGTCGCC
GCCCAGTTCG AGCCCGACCC CGACTTCCCG ACCGTGGACT TCCCCAACCC GGAGGAGCCC
GGCGCCATGG ACATGGCGCT GGCCACCGGC GCCGCCGACC GCTCCGACCT GGTCATCGCC
AACGACCCCG ACGCCGACCG GCTCGCGCTC GCGGTCCCCG GGCACGGCCT GCTCACCGGC
AACGAGGTGG GCGGACTGCT GGCCGAGTAC GTGCTCGACC ACACCAGCGG GTCCGACCGG
GTGGTGGCCG CCTCGATCGT CTCCTCCAGC CTGCTCGGCA AGATCGCCCG CGACCGGGGC
GTGCACTACG AGGAGACCCT CACCGGCTTC AAGTGGCTGG CGCGCGCGGG CGGCCCCGGG
CAGCGGCGGG TCTTCGCGTT CGAGGAGGCG CTGGGCTACT GCGTGGGCGC CGACGGCGGC
CGTCCGGTCG CGGACAAGGA CGGGATCAGC GCGGCCCTGG TGGCCGCGGC GCTCGCCGCC
CGGGCCAAGC GGGAGGGGGC GACCCTGCTC GACCTGCTCG ACGACCAGGC GCGCCGGTAC
GGCCTGCACC TGAGCGACCA GCTGTCGGTG CGGGTGGAGG ACCTGACGGT CATCTCCGCG
GCGATGCGGC GGTTGCGCGC CGAACCGCCC GCCGCGTTCG GTCCCCTGCG GGTGGTGGGG
GTGGACGACT TCGCCGCCGG ACACGCGGGT CTGCCGCCGA CGGACGCCCT GCGCTTCCGG
TTGGAGGGCA GGGGACGTGT GACGCTCAGG CCCTCGGGGA CCGAGCCCAA GCTGAAGGCC
TACGTCGAGG TGGTGCTGGA TGTGGACGGT GACGTGGCGG CCACCCGCGC ACTGGGCTCG
GACCTGCTCG CCGAGCTGAT GGCCTCGGTC ACCGCGGCTG TCGGGGGTTG A
|
|---|
| Protein sequence | MTDLARARRW IAQDPDPDTR AELAGLVERA GRGEADALAD LDSRFGARLE FGTAGLRGAL
GAGPNRMNRV VVMRAAAGIA AWLGAGPGHV VVGYDARHRS ADFARDSAAV LTGAGHRVSL
MPGPLPTPVL AFAVRDLGAD AGIMVTASHN PPRDNGYKVY AGAAKAGGAA DAGTQIVSPA
DAEISAAIDA VGPVDELPLG EGWTVLGEEA VERYLDAVTA LVPGGDRDLA TTYTAMHGVG
GRVLLAAMER AGFPRPSVVA AQFEPDPDFP TVDFPNPEEP GAMDMALATG AADRSDLVIA
NDPDADRLAL AVPGHGLLTG NEVGGLLAEY VLDHTSGSDR VVAASIVSSS LLGKIARDRG
VHYEETLTGF KWLARAGGPG QRRVFAFEEA LGYCVGADGG RPVADKDGIS AALVAAALAA
RAKREGATLL DLLDDQARRY GLHLSDQLSV RVEDLTVISA AMRRLRAEPP AAFGPLRVVG
VDDFAAGHAG LPPTDALRFR LEGRGRVTLR PSGTEPKLKA YVEVVLDVDG DVAATRALGS
DLLAELMASV TAAVGG
|
|---|
| |