Gene Ndas_3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3239 
Symbol 
ID9247096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3872626 
End bp3873678 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content71% 
IMG OID 
Productbasic membrane lipoprotein 
Protein accessionYP_003681151 
Protein GI297562177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.101235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA GCAACACAGT CAGGTTCGCC GCGGCCGCGG CGGCCGGTGT GCTCGCCCTC 
ACCGCGTGTG ACAGCGCGGC CGAAGAGGGC GGCGGCGAGG GCGGCGGCGA GGAGTCCGCC
TCCGAGCTCC AGGTCGGCCT GGCCTACGAC GTCGGCGGTC GCGGCGACCG CTCCTTCAAC
GACTCGGCCT ACCGGGGACT GGAGCGGGCG GCCGAGGAGC TCGGCGTCGA GGTCAACGAC
TTCGAGCCCA GCGACGGCGA GGCCGAGTCC GCCAAGGAGG ACCGCCTGGC CACGATGGCC
GAGGAGGGCT ACGACGTCGT CATCGCCGTC GGGTTCGCCT ACGACGGCGC CGTGCGCGCG
GTCGCGCCGG AGTACCCGGA CGTCCACTTC GCCATCGTGG ACTCCGAGAT CGCCGACATC
GACAACGTCA CCAGCCTGGT CTTCGCCGAG GAGCAGGCCT CCTTCCTGGC CGGCGCCGCC
GCGGCGCTGA CCACCGAGGA GGACCACGTC GGCTTCGTCG GCGGCGTCGA GACCCCGCTG
ATCCACAAGT TCGAGGCCGG TTACGCCGCG GGCGTGGAGC ACGTCAACGA GGACATCACC
GTCGAGGTCG ACTACCTGAG CCAGCCGCCG GACTTCAGCG GCTTCAGCGA CCCCGCCAAG
GGCCGTGAGA CCGCCCAGGC CCAGTACGAC CGCGGCGCGG ACGTGATCTA CCACGCCGCC
GGCGCGTCGG GCAACGGCGT CCTGGAGTCG GCCGTGGCCA ACGACTTCAC CTTCATCGGC
GTCGACAGCG ACCAGTACGA GAACGCCGCC GAGGACCAGA AGCCGCACGT GCTCACCTCC
GCCATCAAGC AGGTGGACGT GGCCGTGTTC GAGCTGATCT CCGCCGCCAC CGAGGGAGGG
GTCGAGGGCG GCATCCAGCG CTTCGAGCTC GCCGACGGCG GCGTGGACTA CACCACCTCC
AACGAGGAGG CGATCAGCCC CGTCCAGGAG CAGCTGGACG AGATCAAGCA GCAGATCATC
GACGGCGAGA TCGAGGTCCC GACCGAGCCG TAG
 
Protein sequence
MKRSNTVRFA AAAAAGVLAL TACDSAAEEG GGEGGGEESA SELQVGLAYD VGGRGDRSFN 
DSAYRGLERA AEELGVEVND FEPSDGEAES AKEDRLATMA EEGYDVVIAV GFAYDGAVRA
VAPEYPDVHF AIVDSEIADI DNVTSLVFAE EQASFLAGAA AALTTEEDHV GFVGGVETPL
IHKFEAGYAA GVEHVNEDIT VEVDYLSQPP DFSGFSDPAK GRETAQAQYD RGADVIYHAA
GASGNGVLES AVANDFTFIG VDSDQYENAA EDQKPHVLTS AIKQVDVAVF ELISAATEGG
VEGGIQRFEL ADGGVDYTTS NEEAISPVQE QLDEIKQQII DGEIEVPTEP