| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3227 |
|---|
| Symbol | |
|---|
| ID | 9247084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3857414 |
|---|
| End bp | 3858028 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003681139 |
|---|
| Protein GI | 297562165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACAG GGGCCGACCG CGAGCCGCGC CAGGAACGCA GCCGGGCCAC CCGAGCCCGA
CTGCTGGAGG CCGCCGTGGC CTGCCTGGCC GAGGAGGGCA CGGCCGGCGC CACCGTGGGC
GCGGTCGCGC GGCGGGCCGG GGTGTCGCGC GGGGCCGCCC AGCACCACTT CCCCACCCGC
GAGGACCTCT TTCTGGCCGT GCTGCGGCAC ATGCTCGACA GCCGCGGCGC GGAGCTGCGG
CGCGGCGCGG CCGCCGTCCC CGAGGGCGGC GGCCGCACCG AGGCGGTCGT GCAGATGGTC
GTGGACGCCT TCACCGGAAC GGACTTCCGC GCCGCCCTCC AGCTGTGGTC GGCCGCCGCC
AGCGACCCGG TCCTGCGCGA GCGCATCATC CCCATGGAGG AGCGGATGGG CCGGGAGATC
CACCGGGCCG CCGTGGAACT GCTGGGGGTG GACGAGTCGG TCCCCGGGGT CCGCGAGACC
GTCCAGGCCA CCCTCGACCT GGCACGCGGC CTGGGACTGG CCAACCTGCT CACCGACGAC
GGGCCCCGGC GCCGCCGGAT CGTGCGCCAG TGGGCGCGCA CCCTGGACGG GCAACTGCGG
ACCCCGGCAC CGTGA
|
|---|
| Protein sequence | MDTGADREPR QERSRATRAR LLEAAVACLA EEGTAGATVG AVARRAGVSR GAAQHHFPTR
EDLFLAVLRH MLDSRGAELR RGAAAVPEGG GRTEAVVQMV VDAFTGTDFR AALQLWSAAA
SDPVLRERII PMEERMGREI HRAAVELLGV DESVPGVRET VQATLDLARG LGLANLLTDD
GPRRRRIVRQ WARTLDGQLR TPAP
|
|---|
| |