| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3222 |
|---|
| Symbol | |
|---|
| ID | 9247079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3852335 |
|---|
| End bp | 3852955 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003681134 |
|---|
| Protein GI | 297562160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCCA TCCGGCTGCT GGTCCTGGGG GCGGTCCGCC TGCGCGGGCG GGCGCACGGC
TACCAGGTGC GCAACGACCT GGAGTCCTGG GGCGCGCACG AGTGGTCCAA CGCCAAGCCG
GGGTCGATCT ACCACGCGCT CAAGCAGATG GCCCGGCAGG GGCTGCTGCA CGCCCACGAG
ACCGCGCCGT CCACCGCCGG GGGTCCGCCC CGGACCGAGT ACGAGACCAC CGGGGAGGGC
ACCCGGGAGT ACTTCGCCCT GCTGCGCCGG GCGGTGTCTT CGCACGACGC GCACACGGAC
GTGCTCTCGG CCGGTCTGGG CTTCGTCGTC GATCTGCCCC GGCGGGAGGC GGTCGACCTG
CTGAGGCGGC GGGTCGAGGG CCTGGAGGAG TGGCGCGGGG GCGTGGTCGC CCACTACGCC
CCGGAGGAGG GGCCCGGACA GGCGGGCCAC ATCGGCGAGA TCATGGACAT GTGGGTGCAC
TCCGCGGAGT CGGACGCGGC GTGGACGCGC TCGCTGATCC GGCGGATCGA GGGCGGCGCC
TACTCCTTCG CCGGTGAGGG GGGCGACCCC TACGAGGGCG TCCTCACCGG CGAGGAGCCG
GAGGCGTCCC CCTCCGGTTG A
|
|---|
| Protein sequence | MSAIRLLVLG AVRLRGRAHG YQVRNDLESW GAHEWSNAKP GSIYHALKQM ARQGLLHAHE
TAPSTAGGPP RTEYETTGEG TREYFALLRR AVSSHDAHTD VLSAGLGFVV DLPRREAVDL
LRRRVEGLEE WRGGVVAHYA PEEGPGQAGH IGEIMDMWVH SAESDAAWTR SLIRRIEGGA
YSFAGEGGDP YEGVLTGEEP EASPSG
|
|---|
| |