Gene Ndas_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3205 
Symbol 
ID9247062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3835128 
End bp3835997 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content73% 
IMG OID 
Product3-methyl-2-oxobutanoatehydroxymethyltransferase 
Protein accessionYP_003681119 
Protein GI297562145 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CAGGAAAGCC CCTCGCCCCG ACCGGGGCCC CGACAGGAAA CACCCTGTAC 
GGCGGGGTCA CCAGCCGACG CGTCACCATC CGCGACCTGG CCGCCGCCAA GGGGCGCGGC
GAGCGCTGGC CGATGCTGAC CGCCTACGAC GCGCTCACCG CCCGGGTCTT CGACGAGGCC
GGGATCCCGG TCCTGCTGGT CGGCGACTCG GCGGCCAACG TCGTCTACGG CTACGACACC
ACCGTCCCGG TGACGGTGGA CGAACTCCTC CCGCTGACCG CGGCGGTGTC CCGCTCCACC
CGGCGGGCGC TCGTCGTGGC CGACCTGCCC TTCGGCTCCT ACCAGGCCTC CCCCCAGCAG
GCGCTGGAGG CGGCCTCGCG GTTCATGAAG GAGGGCGGGG CGCAGGCGGT GAAGCTGGAG
GGCGGCCACG CGGTGGTCCC CCAGGTGGAG CTGCTGGTCT CGGCGGGCGT GCCGGTGATG
GCGCACCTGG GCCTGACCCC CCAGTCGGTG AACACCCTGG GCGGCTACCG GGTGCAGGGC
CGCGGCGAGG CCGCTGCCGG ACTGCTCAAG GACGCCAAGG AGATGGAGCG CGCGGGCGCG
TTCGCGGTCG TGCTGGAGTG CGTGCCCGCC GAGCTGGCCG CGCAGGTGAC CGAGCAGCTG
TCCATCCCGA CCGTGGGCAT CGGCGCCGGT CCGTCCACGG ACGCCCAGGT GCTGGTGTGG
CAGGACATGG CCGGGCTGAG CCCGAAGGTG GCCAAGTTCG TCAAGACCTA CGCCAACCTG
CACGAGACGC TGCGCGAGGC GGCCTCGGCC TACGCCGACG AGGTCGTCAA CGGGGCGTTC
CCCGAGGAGC GCCACTCCTA CGCCGGTTGA
 
Protein sequence
MSTTGKPLAP TGAPTGNTLY GGVTSRRVTI RDLAAAKGRG ERWPMLTAYD ALTARVFDEA 
GIPVLLVGDS AANVVYGYDT TVPVTVDELL PLTAAVSRST RRALVVADLP FGSYQASPQQ
ALEAASRFMK EGGAQAVKLE GGHAVVPQVE LLVSAGVPVM AHLGLTPQSV NTLGGYRVQG
RGEAAAGLLK DAKEMERAGA FAVVLECVPA ELAAQVTEQL SIPTVGIGAG PSTDAQVLVW
QDMAGLSPKV AKFVKTYANL HETLREAASA YADEVVNGAF PEERHSYAG