Gene Ndas_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3204 
Symbol 
ID9247061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3833054 
End bp3834670 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content71% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003681118 
Protein GI297562144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGGACG CGCAGACGGC GTACCGGCGC AGGTGGGGCG GGCTGGCTGT CCTCATCATC 
TGCCTGTTGG TGATCGTGGC CGACAACACG ATCCTCAACG TGGCGCTGCG TGTGCTGTCC
GACCCCGAGC GGGGCCTGGG CGCCAGCCAG TCGCAGCTGG CCTGGGCGAT CAACTCCTAC
ACTCTGGTCT TCGCGGGCCT GCTGTTCACC TTCGGCGTGC TCGGCGACCG GTGGGGGCGC
CGCCGCATGA TCGTGGTGGG GCTGACGGTG TTCGGCGCGG CCTCGGCGCT GTCGGCCTAC
TCCCAGACCC CCGAACAGCT CATCCTGGCC CGCGCGGTCA TGGGGTTCGG CGCCTCCATG
GTGACGCCGC AGACCCTGTC GATCATCGCG AACGTCTTCC CGCCCGAGCA GCGCGCACGC
GCCATCGGGA TCTGGGCGGG CGCGGTCGGG CTGGCGATGG CCATCGGACC CTCGGCGGGC
GGGCTGCTGC TGGAGAACTT CTGGTGGGGG TCGATCTTCC TCGTCAACGT GCCCTTCGTG
GCGCTGGGCC TGGCGCTGGT GTTCTTCCTG ATCCCCGAGT CGCGCGACGC CGACCCCGGC
AGGCTGGACG TGCTGGGGGT GCTGCTGTCC GTCCCCGGCC TGGTGCTGCT CATCTACGGC
ATCATCACCG CGGGCGAACG GGCCTCCCTG GCGGACTGGG ACGTGTACGG CGCGCTCATC
GGCGGTGTGG TGGTGCTGGT GCTCTTCCTG GTGCACGAGT CGCGCGCGCC CAACCCCTCC
CTGGACGTGC GCTTCTTCCG CGACCCGCGG TTCAGCGTCT CCGTGGCCAC CATCATGGTG
CTGTTCTTCA GCATGTCCGG GATCATCTTC TTCCTGAGCT TCTACTGGCA GAGCGTCCGC
GAGTTCTCCC CGTTCGTCGC GGGACTGCTG GTGCTGCCCG CCGCGCTGGG GCAGATGATC
ATGGCGCCGC TCAGCCCGAC GCTCGTGCGC TGGGCGGGGC CGCGCGTGGT CGCCGCGGTC
GGCGTGCTGG GCGTGTGCTC CAGCTTCCTC TTCTTCACCC AGCTCGAACC GGACACGCCG
CTGCCGCTGA TCGTCGGGTT CTTCTTCCTC CAGGCCGGTG CGATGGCCGT GGTCCTGACC
CCCGCCACCG ACGCGATCAT GTCGTCGGTG CCGCCGGGCA GGGCCGGAGC CGCCTCCGCC
GTGCAGAACA CGGTCCGGCA GGTGGCCACG GCGATGGGCG TCGCGATCCT GGGCGCGGTC
ATCTCCTTCC GGTACCGGGC GGGGATCACC CCCACCCTGG AGGAGGTCGC CGACGAGGGC
TCGACGGGTG TGACGGACCA GCGGCTGCGG TCGGCGGGGG AGTCGATCGA GGGCACCCTG
GCGCTGGCCC GGAGCCTGGG GGAGCAGGGG AGGATCCTGG TGGAGCCCGC CAAGGAGGCG
TTCATGTCGG GGCTGCACAC GGCGGCGACG GTGTCGTTGT GTTTCGGGGT GGTCGGGCTG
GTCGTGATCC TGATCTGGAT GCCGCGCGAG ACCGGGCGCC ACCGGCCCCT GGACGCCGAG
GGCGACGGCG GCCCCTCCGC GGGGACCGCG CCCGTCCCCG GCCGGGGGGA GCGGTGA
 
Protein sequence
MVDAQTAYRR RWGGLAVLII CLLVIVADNT ILNVALRVLS DPERGLGASQ SQLAWAINSY 
TLVFAGLLFT FGVLGDRWGR RRMIVVGLTV FGAASALSAY SQTPEQLILA RAVMGFGASM
VTPQTLSIIA NVFPPEQRAR AIGIWAGAVG LAMAIGPSAG GLLLENFWWG SIFLVNVPFV
ALGLALVFFL IPESRDADPG RLDVLGVLLS VPGLVLLIYG IITAGERASL ADWDVYGALI
GGVVVLVLFL VHESRAPNPS LDVRFFRDPR FSVSVATIMV LFFSMSGIIF FLSFYWQSVR
EFSPFVAGLL VLPAALGQMI MAPLSPTLVR WAGPRVVAAV GVLGVCSSFL FFTQLEPDTP
LPLIVGFFFL QAGAMAVVLT PATDAIMSSV PPGRAGAASA VQNTVRQVAT AMGVAILGAV
ISFRYRAGIT PTLEEVADEG STGVTDQRLR SAGESIEGTL ALARSLGEQG RILVEPAKEA
FMSGLHTAAT VSLCFGVVGL VVILIWMPRE TGRHRPLDAE GDGGPSAGTA PVPGRGER