Gene Ndas_3200 details

Gene Information

• Locus tag: Ndas_3200
• ID: 9247057
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: -
• Start bp: 3824628
• End bp: 3828188
• Gene Length: 3561 bp
• Protein Length: 1186 aa
• Translation table: 11
• GC content: 68%
• Product: DNA polymerase III, alpha subunit
• Protein accession: YP_003681114
• Protein GI: 297562140

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCGACT CCTTCGCCCA TCTGCACGTC CACACCGAGT ACTCGATGCT CGACGGGGCC 
GCCAAACTCA AGCCCCTGTT CAAGGAGGCG GCGCGGCTGG GCATGCCCGC GGTCGCGATG 
ACCGACCACG GCAACATGTT CGGGGCCTAC GAGTTCTACC AGCAGTCCAA GGGCACCGGC 
GTCACCCCGA TCATCGGCAT CGAGGCCTAC GTCGCACCCG AGTCGCGCTT CCACAAGAAG 
CGGGTCTTCT GGGGGCGGTC CAGCGGCTCC GACGACGCCT CGGCGGAGGG CGGCAAGGAC 
ATCTCCGGCG GCGGCCGCTA CCTGCACATG ACGATGCTGG CGCAGAACGA GAAGGGCCTG 
CGCAACCTGT TCCGGATGTC CTCGCTGGCG TCCATGGAGG GCTACTACAT GAAGCCCCGC 
ATGGACCTGG AGCTCATGTC GGAGTACAGC GAGGGCATCA TCGTCTCCAC CGGCTGCCCC 
TCGGGCGGTG TGCAGACGCG GCTGCGGCTG GGCCAGGAGA AGGAGGCCGT CGCCTACGCG 
GCCGGGCTCC AGGACATCTT CGGCAAGGAG AACGTCTTCC TGGAGCTGAT GGACCACGGC 
GTGCCCATCG AGAAGGAGGT CCGCGACGGC CTGCTCAGGG TCGGCCGCGA GCTGGACATC 
CCGCCGCTGG TGACCAACGA CTCCCACTAC GTGTACGAGT CCCAGGCCTC GGCGCACGAC 
GCGCTGCTGG CGGTGGGCGT GGGCAAGAAC CTGGACGACC CCACCCGGTT CCGGTTCAAC 
GGGTCGGGCT ACTACCTCAA GTCCGCCGAG GAGATGCGCG GCATCCTCAA CTTCGAGGAG 
TGGGAGCAGG GGTGCAGGAA CACCCTGCTG GTGGCCGAGC GCATCGACCC GGGCGCCTAC 
GACGCGGTGT TCGCCCACCG CGACCTGATG CCGGTCTTCC CCGTGCCCGA GGGGGAGACC 
CAGGCCTCCT GGCTGGCCAA GGAGGTCGAG CGGCTCCTGC CCACCCGCTA CCCGGACGGG 
ATCAACGGCG AGATCCGCCA GCGGGTCGAC TTCGAGCTCG GCATCATCAA CGAGATGGGT 
TTCCCCGCCT ACTTCCTCGT GGTCGCCGAC ATCTGCCAGT ACGCGCGCAA GAACGGCATC 
GCGCTGGGCC CGGGGCGAGG CTCGGCGGCG GGGTCGATGA TCGCCTACGT CCTGGGCATC 
ACCGACCTGG ACCCGCTGGA GCACGGGCTG CTGTTCGAGC GGTTCCTCAA CCCCGAGCGC 
GTCACCATGC CCGATGTCGA CCTGGACTTC GACGAGCGTC GGCGCGGGGA GATGATCGAG 
TACGTCACCC GCCTGTACGG CGCCGAGCGC GTCGCGCAGA TCCTGACCTT CGGCACCATC 
AAGGCCAAGG CCGCGGTCAA GGACTCCACG CGCATCCTGG GCATGCCCTA CTCGGTGGGC 
GACCAGATCA CCAAGGCCTT CCCCGCCGCG GTCGGCGGCA AGGAGATCCC GCTGGAGGCG 
GTGACCAACA CCGAGCACGA GCGCTACGGC GAGACCACCG AGCTGCGCAA CCTCATCGAC 
AACGACGCGC AGGTCGCCAA GGTGATGGAG ACCGCGCGCG GTATCGAGGG CCTGACCCGC 
GGTACGGGTG TGCACGCCGC GGGCGTCATC CTGTCCAAGG AACCCCTGCT CGACGTCATC 
CCGCTGCACA AGCGCGACAC CGACGGCGCC ATCATCACGG GCTTTCCCTA CCCTCAGTGC 
GAGGACATGG GCCTGCTCAA GATGGACTTC CTGGGCCTGC GCAACCTCAC GATCATGGAC 
GACGCGGTCA AGTCCATCAA GGAGGCCGAG GGGATCGACA TCGACCTCGG CAAGCTCCCC 
CTGGACGACA GGAAGACCTA CCAGCTCCTC TCGCGCGGCG ACACCCTGGG CGTGTTCCAG 
CTGGACGGCG GCGCGATGCG CAACCTGCTC AAGCGCATGG AGCCCAAGAA GTTCGGCGAC 
ATCGCGGCCG TGCTGTCGCT GTACCGGCCC GGTCCGATGG CCGCGAACGC GCACAACGAC 
TACGCCGACC GCTCGAACGG CCGCCAGGAG GTCACTCCGA TCCACCCGGA GCTCAAGGAC 
GCTCTGGAGC CGATCCTGGG GGAGACCTTC CACCTGCTCG TCTACCAGGA GCAGATCATG 
GCCATCGCGC AGCAGCTGGC CGGGTACACC CTGGGCGGCG CCGACCTGAT GCGCCGCGCG 
ATGGGCAAGA AGAAGAAGGA GGCCCTGGAG GAGGAGGAGG CCAAGTTCTT CCCCGGGGCC 
GAGGCGCGCG GCTTCTCCAA GGAGGCCACG CAGGCGCTGT GGGACGTCAT GCTGCCCTTC 
GCCGGGTACG CGTTCAACAA GTCGCACGCC GCCGGGTACG CCCTGGTCTC CTACTGGACC 
GCCTACCTCA AGGCCAACCA CCCCGCCGCC TACATGGCCG CGCTGCTGAC CTCGGTCAGC 
GACGACAAGG ACAAGATGGC GGTCTACCTG GCCGAGTGCC GGACCCAGGG CATCAAGGTG 
CTGCCCCCCG ACGTCAACGA GTCGGGTCTG CGCTTCACCC CGGTGGGCAA GGACATCCGC 
TTCGGCATGG GCGCGGTGCG CAACGTCGGC GCCAACGTCG TCAACTCGAT CATCAGGACC 
CGCACGGAGA AGGGCAAGTT CAGCTCCTTC ACCGACTTCC TGTCCAAGAT CGAGCTGGCG 
GCCTGCAACA AGCGCGTCAT CGAGTCGCTG ATCAAGGCGG GCGGCTTCGA CTCGCTCGGC 
CAGCCCCGCC GTGAGCTGTA CCGCCACCAC GAGACGGCGG TGGACGGCAT GATCAGCTCC 
AAGAAGCAGG AGGCGCACGG CCAGTTCGAC CTGTTCGGCG GCGGTGACGA CGGCGACTCC 
ACCCCCATCG GCCTCAACAT CAACTGGGGC GACGAGGAGT GGGACCGCAA GACCAAGCTG 
GCCTTCGAAC GGGAGATGCT GGGCCTGTAC GTCTCCAGCC ACCCGCTGGC CGGTGCCGAG 
CGGGTGCTGG CCCGCTCACG CGACACCTCC ATCGCCCAGA TCGTGGCGGG CGAGATGGCC 
CGCGAACGCG GTGAGGTGCG CATCTCCGGC CTGATCTCCA AGGTGGACAA GCGCACCAAC 
AAGGCGGGCA ACCAGTGGGC GATCGCCACG GTCGAGGACC TGGACGCCTC GATGGAGGTG 
CTGTTCTTCC CCAAGACCTA TCCGCTGTAC GTGCAGGCCC TGCTGGAGGA CACCGCGGTC 
ACCGTCAAGG GCAGGCTCAA CGACCGGGAC GGCACGTGGT CGATGTTCGC CTCGGAGATG 
TCGATCCTGG ACATCTCGCA CGTCACCGAG GGGGAGCCCC CGGTGCTGCT GACGGTCGCG 
GAGGAGCGCC TCACCCCCGA GCTGGTCGGC GACCTGCGCC AGGTGCTGGC CACGCACAAG 
GGGGACACCC CCGTGCGGAT CCGGGTGGAC AACCCGGTCC GGTCGCGGGT CTACGCCGTG 
GACCGCTACT CGGTGCGGAT CTCCCCGGAG TTCAACGGTG AGGTCAAGAG CCTGCTGGGG 
GCCTTCGCGG TCGACTACTG A 

 

Protein sequence

MADSFAHLHV HTEYSMLDGA AKLKPLFKEA ARLGMPAVAM TDHGNMFGAY EFYQQSKGTG 
VTPIIGIEAY VAPESRFHKK RVFWGRSSGS DDASAEGGKD ISGGGRYLHM TMLAQNEKGL 
RNLFRMSSLA SMEGYYMKPR MDLELMSEYS EGIIVSTGCP SGGVQTRLRL GQEKEAVAYA 
AGLQDIFGKE NVFLELMDHG VPIEKEVRDG LLRVGRELDI PPLVTNDSHY VYESQASAHD 
ALLAVGVGKN LDDPTRFRFN GSGYYLKSAE EMRGILNFEE WEQGCRNTLL VAERIDPGAY 
DAVFAHRDLM PVFPVPEGET QASWLAKEVE RLLPTRYPDG INGEIRQRVD FELGIINEMG 
FPAYFLVVAD ICQYARKNGI ALGPGRGSAA GSMIAYVLGI TDLDPLEHGL LFERFLNPER 
VTMPDVDLDF DERRRGEMIE YVTRLYGAER VAQILTFGTI KAKAAVKDST RILGMPYSVG 
DQITKAFPAA VGGKEIPLEA VTNTEHERYG ETTELRNLID NDAQVAKVME TARGIEGLTR 
GTGVHAAGVI LSKEPLLDVI PLHKRDTDGA IITGFPYPQC EDMGLLKMDF LGLRNLTIMD 
DAVKSIKEAE GIDIDLGKLP LDDRKTYQLL SRGDTLGVFQ LDGGAMRNLL KRMEPKKFGD 
IAAVLSLYRP GPMAANAHND YADRSNGRQE VTPIHPELKD ALEPILGETF HLLVYQEQIM 
AIAQQLAGYT LGGADLMRRA MGKKKKEALE EEEAKFFPGA EARGFSKEAT QALWDVMLPF 
AGYAFNKSHA AGYALVSYWT AYLKANHPAA YMAALLTSVS DDKDKMAVYL AECRTQGIKV 
LPPDVNESGL RFTPVGKDIR FGMGAVRNVG ANVVNSIIRT RTEKGKFSSF TDFLSKIELA 
ACNKRVIESL IKAGGFDSLG QPRRELYRHH ETAVDGMISS KKQEAHGQFD LFGGGDDGDS 
TPIGLNINWG DEEWDRKTKL AFEREMLGLY VSSHPLAGAE RVLARSRDTS IAQIVAGEMA 
RERGEVRISG LISKVDKRTN KAGNQWAIAT VEDLDASMEV LFFPKTYPLY VQALLEDTAV 
TVKGRLNDRD GTWSMFASEM SILDISHVTE GEPPVLLTVA EERLTPELVG DLRQVLATHK 
GDTPVRIRVD NPVRSRVYAV DRYSVRISPE FNGEVKSLLG AFAVDY