Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3196 |
Symbol | |
ID | 9247053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 3820194 |
End bp | 3822062 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003681110 |
Protein GI | 297562136 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAACA CTTCATCCCC CTTTTCCTCC GTCCCCGGTA TGTTCCTCTC CCGCGTCGCC GAGTCCCCCG ACTCCGAGGC GTTCAGCTAC CCCCTTCCCG GCGCGTCCGG CGCCCCCGAG AAGTGGGAGA CCCTCACCTG GTCCCAGACC CGCGACCGGG TGCGCGACAT CGCGCTGGGC CTGCACGACC TGGGCGTGAC CCCCCAGGCC CGGTGCGCGA TCGTCTCCAG CACACGCGTG GAGTGGATCC TCGCCGACAT GGCCGTGCTG TGCGCGGGCG GAGCCTCCAC CACCGTCTAC CCCTCCTCCA CCCCGCCCGA CTGCGCCTTC ATCGTCTCCG ACTCGGGCAG CATGGTGGCC TTCGCCGAGA ACGACGAGCA GGTCGCCAAG CTGGTCGACC AGCGCGCGCG GATGCCGGGG CTGTCGCGGG TGATCGCCTT CGAGGGCGCG GCCGGGGGCG ACGACGACTG GGTGATGTCC CTGGAGGAGC TGGCCGCCCG GGGCGCCGAA CTCCACGCCC AGGACCCCGA CCTGTTCGAG GCGCTGGTCG CGGCGGTCGC ACCCGACCAC CTGGCCACGC TGATCTACAC CTCCGGCACC ACGGGCAGAC CCAAGGGCGT GCGGCTGGAC CACGCGAACT GGCTCTACGA GTCCCAGGCC ATGGCGGACC TGGACACCGA GCTGCGCGCG CAGGGCTGGG ACCTGATGGG CCCCGACGAC GTCCAGTACC TGTGGCTGCC GCTGTCGCAC GTGTTCGGAA AGCTCATGCA GGTCAGCCAG CTGCGGATCG GCTTCCGGAC CGCCGTGGAC GGCCGCCCCG ACCGGATCGT GGACAACCTG GCCGTCGTGC GGCCCACCTT CATGGCCGCC GCCCCGCGCA TCTTCGAGAA GGTGTACAAC CGCGTGGTCA TGCAGGCCCG GGAGGGCGGC GCGGCCAGGT ACCGGATCTT CCGGTGGGCC GCGGGGGTGG GCGACCGGGT CGCCCGGCTC AGGGAGGAGG GCCGCGAACC CACGGGCCTG CTCGCCGCGC AGCACCGGGC CGCCGACAGG CTCGTGTTCG CCAGGCTGCG GGCGCGCTTC GGGGAGCGGC TGAAGTTCTT CATCTCCGGC AGCGCGCCGC TGTCCCCCGA GATCGGCCGG TTCTTCTACG GCGCCGGGAT CGTCATCCTG GAGGGTTACG GGCTCACCGA GACCAGCGCC GGGACGTTCG TCAACCGGCC CGGCGACGTG CGGTTCGGCA CGGTCGGACT GCCCATGCCC GGTACCGAGG TGCGCATCGC CGAGGACGGC GAGATCCTCA TCCGGGGCGG CGGCGTGATG CGCGGCTACC ACAACCTCTC CGGCGCCACG GAGGAGGTGC TCACCGCGGA GGGCTGGTTC GCCACCGGGG ACATCGGCGC CCTGGAGAAC GGCCGCCTGC GCATCACCGA CCGCAAGAAG GAGCTGATCA AGACCTCCGG CGGCAAGTAC GTGGCGCCCC AGAGCATCGA GAGCCGCTTC AAGGCGCTGT GCCCCTACGT CAGCAACCTG GTCGTGCACG GCGACCGGCG CCCCTACTGC GTGGCGCTGG TGGCCCTGGA CCCCGAGGCG ATCGACGCGT GGGCGGCGGA GCACGGACTG GGCCACCTCG ACTACACGGG CCTGACGCGG GAGCCCAGGG TCCGGGAGAT GGTGCAGGAG GCCGTCGACG AGCTCAACCG TGGTCTGCCC CGGCACGAGA CCGTGAAGAG GTTCGCGATC CTGCCGAGCG ACCTGACGGT CGAGGAGGGC GAGATGACGC CCAGCCTGAA GATGCGGCGG CGGGCGGTCG AGGACAAGTA CCGCGACCTG CTCGACGGCA TGTACGAGGA GACCGTCCAC CGGTTCTGA
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Protein sequence | MGNTSSPFSS VPGMFLSRVA ESPDSEAFSY PLPGASGAPE KWETLTWSQT RDRVRDIALG LHDLGVTPQA RCAIVSSTRV EWILADMAVL CAGGASTTVY PSSTPPDCAF IVSDSGSMVA FAENDEQVAK LVDQRARMPG LSRVIAFEGA AGGDDDWVMS LEELAARGAE LHAQDPDLFE ALVAAVAPDH LATLIYTSGT TGRPKGVRLD HANWLYESQA MADLDTELRA QGWDLMGPDD VQYLWLPLSH VFGKLMQVSQ LRIGFRTAVD GRPDRIVDNL AVVRPTFMAA APRIFEKVYN RVVMQAREGG AARYRIFRWA AGVGDRVARL REEGREPTGL LAAQHRAADR LVFARLRARF GERLKFFISG SAPLSPEIGR FFYGAGIVIL EGYGLTETSA GTFVNRPGDV RFGTVGLPMP GTEVRIAEDG EILIRGGGVM RGYHNLSGAT EEVLTAEGWF ATGDIGALEN GRLRITDRKK ELIKTSGGKY VAPQSIESRF KALCPYVSNL VVHGDRRPYC VALVALDPEA IDAWAAEHGL GHLDYTGLTR EPRVREMVQE AVDELNRGLP RHETVKRFAI LPSDLTVEEG EMTPSLKMRR RAVEDKYRDL LDGMYEETVH RF
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