Gene Ndas_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3184 
Symbol 
ID9247041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3808847 
End bp3810862 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003681098 
Protein GI297562124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0347906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG GCACGAGCAC CAGGGAACCG GAGAACGAGG AGGGAACGGC ACCGCCCGGA 
GCCGCCGACG GACCGGGAGC ACGCCAGTCG ACCGACGCCG CCGAGCACAC CGGGGTCTTC
GCCCGCGGCA TGCGGGTGCT GTGGGTCGCC GCCCGCACCG AACCGTGGGT CTTCCTCGCC
GCCGTCGTCG GGGCCATGCT GCACGCCGCC GTCAACGTCG GCTCCGCCTC GGTCCTGGGC
CACCTCACCG ACGCCACCAT CCTCCCCGCC TTCGAACAGG GCAGCACCAC CGCCGCCGCC
CTCGTCGGCG CCGCCGCGCT CCTCATGGGC GTGGGACTGG GCAAGGCCAC CGGCATCGCC
ATGCGCCGCA TGCTCGCCGC GCTCATGCAG TTCCGCATGC AGGCCCGCTA CCGCCGCGCC
GTCGCCCGCA AGTACCTCGA ACTGCCCCTG TCCTGGCACC ACCGCCACCC CACCGGACAG
CTGCTGTCCA ACGCCAACGC CGACGTCGAG GCCGCCTGGC AGCCGCTCGC CCCGCTGCCC
ATGGCCGTCG GCAGCGTGTT CATGCTGGTC ATCGCGGCCA TCGCCATGCT CACCACCGAC
CCGGTCCTGG CCCTGGTCGC CTTCGTCGTC TTCCCGGTCC TGGCCGCCGC CAACGTCGTC
TTCCAACGGC GCGTCTCACC CATGGCCTCG CGCGCCCAGG CGCTGCGCGC CGAGGTCAGC
GGCGTCGCCC ACGAGTCCTT CGACGGCGCA CTCGTCGTCA AGACCCTGGG CCGCGAGGAC
ACCGAGACCG AGCGCTTCAC CTCCGCCGCC CACCGCCTGC GCGACGCGCT CATCCAGGTC
GGCCGGATGC GCTCGATGTT CGACCCGGTC ATGGAGGCCC TGCCCAACTT CGGCGTGCTC
GCCGTCCTGC TCCTGGGCAT GTGGCGGCTG TCCACCGGCG CCATCGACGC CGGGGACCTG
GTCCAGATCG CCTTCCTGTT CACCCTCCTG GCCCTGCCCA TCCGCTCCTT CGGGTGGATC
CTGGGCGACC TGCCCCGCAG CGTCGTGGGC TGGGACCGCG TCCAGTCCGT ACTCAACTCC
GGCGGCGCCA TGGAGTACGG CACCCGCACC CTGGAGGACA CTCCCACCGG CATCGCCCTG
AGCGCCCGCG GCGTGACCTT CTCCTACGCC GACTCCTACG ACGCGCGGGG CGGCGCGCGC
GACCTCATGG ACGGCGGAGC CGACACCGCG CCGCGCACCA CCGTCCTCAA CGGCGTGGAC
CTGGACATCG CCCCCGGACG CACCGTCGCA CTGGTCGGCC CCACCGGGTC GGGCAAGTCC
ACGCTCACCA CCGTCCTCAT GCGCCTGGTC GACGCCGACA CGGGCACCGT CACCCTCGAC
GGCGTCGACG TGCGCGACCT GGCCCGCGAC CAGATCCCCC GGCACGCTGC CCTGGTGCCC
CAGGGCACCT TCGTGTTCGA GGACAGCGTC CGCGACAACA TCACCCTGGG CGCCGACGCC
GACGACGACC AGGTCTGGGC CGCCCTGCGC CTGGCCCGCG CCGACGGCTT CGTCCGAGAA
CTGGAGGGCG GACTCGACGC CCGGCTCGGC GAGAAGGGCA CCACCCTCTC CGGAGGGCAG
CGCCAGCGCC TGGCCCTGGC CCGCGCGATC GTGCGCCGCC CGAGGCTGCT CATCATGGAC
GACGCCACCT CGGCCGTGGA CCCCCAGATC GAGGCGCAGA TCCTGGCGGG CCTGCGCGAA
CGCGACGACG CCGCCACCGT GGTCGTGGTC GCCTACCGCC GCGCCACCAT CGAACTCGCC
GACGAGGTCG TCTACATGGA ACGCGGACGC GTGCTGGCCC GCGGCACCCA CGAGGAACTG
CTCACCACCT CGCCCGGCTA CACCAGGCTC GTCACCGCCT ACGAGCGCGC CTCCGCCGAG
GGGCAGGCCG AGACAGACCC GCTGCCCGAG GAACCAGGCC CCCTCGAACC CGCCCGCCCC
ACCCGTGACG ACGCCGCCGA GGAGGCCACC CGATGA
 
Protein sequence
MARGTSTREP ENEEGTAPPG AADGPGARQS TDAAEHTGVF ARGMRVLWVA ARTEPWVFLA 
AVVGAMLHAA VNVGSASVLG HLTDATILPA FEQGSTTAAA LVGAAALLMG VGLGKATGIA
MRRMLAALMQ FRMQARYRRA VARKYLELPL SWHHRHPTGQ LLSNANADVE AAWQPLAPLP
MAVGSVFMLV IAAIAMLTTD PVLALVAFVV FPVLAAANVV FQRRVSPMAS RAQALRAEVS
GVAHESFDGA LVVKTLGRED TETERFTSAA HRLRDALIQV GRMRSMFDPV MEALPNFGVL
AVLLLGMWRL STGAIDAGDL VQIAFLFTLL ALPIRSFGWI LGDLPRSVVG WDRVQSVLNS
GGAMEYGTRT LEDTPTGIAL SARGVTFSYA DSYDARGGAR DLMDGGADTA PRTTVLNGVD
LDIAPGRTVA LVGPTGSGKS TLTTVLMRLV DADTGTVTLD GVDVRDLARD QIPRHAALVP
QGTFVFEDSV RDNITLGADA DDDQVWAALR LARADGFVRE LEGGLDARLG EKGTTLSGGQ
RQRLALARAI VRRPRLLIMD DATSAVDPQI EAQILAGLRE RDDAATVVVV AYRRATIELA
DEVVYMERGR VLARGTHEEL LTTSPGYTRL VTAYERASAE GQAETDPLPE EPGPLEPARP
TRDDAAEEAT R