Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3183 |
Symbol | |
ID | 9247040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3807003 |
End bp | 3808850 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003681097 |
Protein GI | 297562123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0496576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CCACCCGCGA CGAGCAGCGA GAGCGGGAGG GGGAGGAGCG GCCCGGCCGC GCCCCCGACG ACCCGGCCGT GTCGCTGCAC CGCTCCTCCG AGGGAGCGAT GGACACGCTC AGGCGCGGTC TGCGGCTCTC CCCGGAGTTC GCCCGCGGCC TGTGGCTCAC CCTGGTCTTC GCCGTCGTGG CCACCGCCGG CAAGGTCATC GTGCCCATCG CCGTCCAGCA GATCATCGAC AACGGGCTGA CCGGCGCGAA CGGCCCCGAC CTGGGCTTCG TCACCCGCAT GGTGACCGTC TGCGCCGCCC TGCTCGTGGT CACCATGATC TGCTCCTACC TGATGAACGT GCGCCTGTAC CGGGCCACCG AGTCCGGCCT GGCCACACTG CGCCGCAAGG CCTTCCGGCA CGTGCACGAC CTGTCCGTGC TCACCCAGAA CAGCGAGCGC AAGGGCGCCC TGGTCTCGCG CGTCACCAGC GACGTCGACC AGATCAGCAC CTTCATGCAG TGGGGCGGCC TGCTCCTGCT GGTCAGCAGC GGCCAGCTCC TGGTCGCCAC CGTCCTGATG GCGGTCTACT CCTGGCAGCT CACCCTCGTG GTGTGGATCT GCTTCCTGCC GCTGCTGTTC GGCGTGCGCT GGCTCCAGAA GCTGCTCTCC AAGGCCTACC TCACGGTCCG AGAGAACACC GGCGACATGC TCGGCGTCAT CGGCGAGACC GTCATGGGCG CCTCCGTCAT CCGCGCCCAC GGCACCGAGG GGCGCACCGC CGAGCGCATC GACACCACCG TCCTGACCAC GCGCCGCTCC CAGATCCGCG CCCAGCGGCT GTCCATGGCG GTCTCGCCCT TCGCCGAGAT CATCGCCGCC CTGGGCAACA CCGCCGTCGT CCTCATCGGC GTCTGGCTCG GCCTGGACGG CGGCCTGACC GCCGGGCAGC TCATCGCCTT CCTGTTCCTG ATGACCCTGT TCATCCAGCC GATGATGATG GCCACCGAGA TCTTCAACGA GGCCCAGAAC GCCATCGCGG GCTGGCGCCG CGTCCTGGGC GTGCTCGACA CCGTCCCCGA CATCGCCGAC CCCGGCGAGG CGGGCCGGGT GCTGCCGCGC GGACCGGTCC GGGTCTCCTT CGACGGGGTG ACCTACTCCT ACCCCGAGGG CCCCGTCGTC CTCGACGACG TCAGCGTCGA GATCACCCCC GGCACCCGCG TGGCCGTGGT GGGCGAGACC GGCTCGGGCA AGACCACCTT CGTCAAACTG CTCACCCGCC TCATGGACCC CGCCCGGGGC ACCGTCCGGC TCGACGGCGT CGACCTGCGC GAGGTGGCCT TCTCCTCCCT GCGCAGCCGC GTGGTGATGG TCCCGCAGGA GGGCTTCCTC TTCGACAGCT CCCTGGGCGA CAACATCCGC TTCGCCCGCC CCGAGAGCAC CGACGCCGAA CTGGAGGCGG CCGTCACCGA ACTGGGGCTG ACCGAGTGGC TCGACAGCCT CGCCCACGGA CTCGACACCC CCGTGGGCCA GCGCGGGGAG TCGCTCTCGG CGGGGGAGCG GCAGCTCGTC GCCCTGGTGC GCGCCTACAT CGCCGACCCC GACCTGCTGG TACTGGACGA GGCCACCTCG GCGGTGGATC CGCACACCGA GGTGCGCATC CAGCGAGCCC TGGACCGGCT CACCCGCGGA CGCACCTCCG TGGCCATCGC GCACCGGCTC TCCACCGCCG AGGCCGCCGA CCGGGTCCTC GTCTTCGACG ACGGGCGCGT CGTGCAGAGC GGCTCGCACA CCGAACTGGT GGACAGGCCG GGCGTGTACG CCGACCTGTA CGCCTCCTGG GTGCGCTCCT CGGCCTGA
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Protein sequence | MSAPTRDEQR EREGEERPGR APDDPAVSLH RSSEGAMDTL RRGLRLSPEF ARGLWLTLVF AVVATAGKVI VPIAVQQIID NGLTGANGPD LGFVTRMVTV CAALLVVTMI CSYLMNVRLY RATESGLATL RRKAFRHVHD LSVLTQNSER KGALVSRVTS DVDQISTFMQ WGGLLLLVSS GQLLVATVLM AVYSWQLTLV VWICFLPLLF GVRWLQKLLS KAYLTVRENT GDMLGVIGET VMGASVIRAH GTEGRTAERI DTTVLTTRRS QIRAQRLSMA VSPFAEIIAA LGNTAVVLIG VWLGLDGGLT AGQLIAFLFL MTLFIQPMMM ATEIFNEAQN AIAGWRRVLG VLDTVPDIAD PGEAGRVLPR GPVRVSFDGV TYSYPEGPVV LDDVSVEITP GTRVAVVGET GSGKTTFVKL LTRLMDPARG TVRLDGVDLR EVAFSSLRSR VVMVPQEGFL FDSSLGDNIR FARPESTDAE LEAAVTELGL TEWLDSLAHG LDTPVGQRGE SLSAGERQLV ALVRAYIADP DLLVLDEATS AVDPHTEVRI QRALDRLTRG RTSVAIAHRL STAEAADRVL VFDDGRVVQS GSHTELVDRP GVYADLYASW VRSSA
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