| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3165 |
|---|
| Symbol | |
|---|
| ID | 9247022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3784696 |
|---|
| End bp | 3786150 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | glutamate synthase, NADH/NADPH, small subunit |
|---|
| Protein accession | YP_003681079 |
|---|
| Protein GI | 297562105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00040465 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.173868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACC CCAAGGGCTT CCTGAAGACC ACCGAGCGAG AGCTCCCCAA GCACCGACCC
GTCGACGTGC GCATCCAGGA CTGGCGCGAG GTCTACGAGG ACTTCGACCG GGGAACCGTC
ACCAAGCAGG CATCACGCTG CATGGACTGC GGCATCCCCT TCTGCCACAA CGGCTGCCCC
CTCGGCAACC TCATCCCCGA GTGGAACCAC CTCGTCCACA CCCACGACTG GGCCGAGGCG
ATCGAACGCC TGCACGCCAC CAACAACTTC CCGGAGTTCA CCGGCAGGCT CTGCCCCGCC
CCGTGCGAAT CCGCGTGCGT GCTCGGCATC AACCAGCCCG CCGTCACCAT CAAGAACGTC
GAGGTCTCCA TCATCGACCG CGCGTGGGAG GAGGGCTGGG TCAAGCCCCT GCCCCCCACC
ACCCGCACCG GCAAGAAGGT CGCCGTCGTC GGCTCCGGCC CCGCCGGACT CGCCGCCGCC
CAGCAGCTCA CCCGCGCCGG ACACGACGTC ACCGTCTACG AACGCGCCGA CCGCATCGGC
GGCCTCCTGC GCTACGGCAT CCCCGAGTTC AAGATGGAGA AGCGGCACAT CGACCGCCGC
CTCGCCCAGA TGAGCGCCGA GGGCACCACC TTCCGCGCCG GAGTCGACGT CGGCACCGAC
ATCACCGCCG ACCAGCTGCG CGCCGACCAC GACGCCGTCG TCATCAGCGG CGGCGCCACC
GCCTGGCGCG ACCTGCCCGC CAAGGGCCGC GAACTCGCCG GTATCCACCA GGCCATGGAG
TACCTGCCCC TGGCCAACCG GGTCCAGGAG GGCGACTACG ACACGCCCGC CATCAGCGCC
AAGGGCAAGC ACGTCGTCGT CATCGGCGGC GGCGACACCG GCGCCGACTG CGTCGGCACC
GCCCACCGCC AGGGCGCCGC CTCGGTCACT CAGCTGGAGA TCATGCCCAA GCCGCCCGCC
ACGCGGCCCG ACAACCAGCC CTGGCCGACC ATGCCCATGC TCTACAAGGT CACCAGCGCC
CACGAGGAGG GCGGCAAGCG GATCTACTCC GTCAACACCG TCGAGTTCCT CGGCGACGAC
AACGGCCAGG TCCGCGCCCT CAAGCTCGTC GAGGTCAAGC GCACCGACAA GGGCTTCGAA
CCCGTCCAGG GCACCGAGCG CGAGATCCCC GCCGAACTCG TCACGCTCGC CATGGGCTTC
GTCGGACCCC AGAAGGAGGG CCTGCTCGAC CAGCTCGGCG TCGAACTCGA CGGACGCGGC
AACGTCGTCC GCGACACCGA CTACCGCACC ACCGTCGACG GCGTCTTCTG CGCCGGAGAC
ATGGGCCGCG GCCAGTCGCT CATCGTCTGG GCCATCGCCG AGGGCCGCTC CGCCGCCGCC
GGAGTCGACC GCTACCTCAC CGACGACAGC GCACTGCCGG TCACCATCCC GCCGACCGCA
CGACCGCTCG TCTAG
|
|---|
| Protein sequence | MADPKGFLKT TERELPKHRP VDVRIQDWRE VYEDFDRGTV TKQASRCMDC GIPFCHNGCP
LGNLIPEWNH LVHTHDWAEA IERLHATNNF PEFTGRLCPA PCESACVLGI NQPAVTIKNV
EVSIIDRAWE EGWVKPLPPT TRTGKKVAVV GSGPAGLAAA QQLTRAGHDV TVYERADRIG
GLLRYGIPEF KMEKRHIDRR LAQMSAEGTT FRAGVDVGTD ITADQLRADH DAVVISGGAT
AWRDLPAKGR ELAGIHQAME YLPLANRVQE GDYDTPAISA KGKHVVVIGG GDTGADCVGT
AHRQGAASVT QLEIMPKPPA TRPDNQPWPT MPMLYKVTSA HEEGGKRIYS VNTVEFLGDD
NGQVRALKLV EVKRTDKGFE PVQGTEREIP AELVTLAMGF VGPQKEGLLD QLGVELDGRG
NVVRDTDYRT TVDGVFCAGD MGRGQSLIVW AIAEGRSAAA GVDRYLTDDS ALPVTIPPTA
RPLV
|
|---|
| |