Gene Ndas_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3163 
Symbol 
ID9247020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3783141 
End bp3784049 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003681077 
Protein GI297562103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0045094 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.153591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTG TGACCTGGGA CTCCCTTCGC GCCGCAGAAC ACTTCACCAT GCGAAACGCC 
CGGCTCATCG ACCGGCTCCG CTTCGCCCAC CTCTTCCAGA ACGGACCCAC CGAACCCGTC 
CGCTCCGCAC TCTCCGCCTA CCGCAACCTC GACGGCGGCT ACGGCAACGG ACTCGACCCC 
GACCTGCGCG GACACACCAG CCAACCCGCC GCCACCGAGA TCGCCCTGCG CTACCTCGAC 
GACCTCGGGC CCATCCCCAC CACCCTCGGC ACCGGCATCT GCCGCTACCT CACCACCGTC 
ACCAACCCCG ACGGCGGCCT GCCCTGCGTA CGACCCAACG TCCGCCACAC CGAAGCCGCC 
CCCTGGTGGC AGCAGCACCA CGACTTCACC AGCGACCTCG GACTCACCGC ACTCCTCGCC 
GGATACCTCC ACAAACACAA CATCAGCCAC ACCTGGCGCG ACAACGCCAC CGCCTACTGC 
TGGAAACGCA TCAACGCCCT GCACTGGACC GACCCCCACC AGGCCATCGG CATCTGCACC 
TTCCTCCAAC ACGTCCCCGA CCGCGACCGC GCCCTGCGCA CCACCAGCCG ACTGCACCCC 
ATGATCCGCG CCGTCATCGA CACCGACCCC AAACCCAACC CGCGCCGACA CGCCCACACC 
GCACTCGACA TCGCCACCCA CCCCGACCAC ATCGCCCGAC CCCTGTTCAC CGACGCCGAG 
ATCCAACGCA ACCTCGACTT CTTCGAACAG ACCCAACGAC CCGACGGCGG CTGGGACGCC 
ACCTGGCAGC ACTGGGACAC CGCCGCCACC CTCGAACGCG AAGGCATGCG CACCGTCCAA 
CGCCTGCGCA TCCTGTGCGC CTACGGCCGC GTCCAGGGCT ACCTCCCGCC CCGCCGCCGC 
GACACCTGA
 
Protein sequence
MTVVTWDSLR AAEHFTMRNA RLIDRLRFAH LFQNGPTEPV RSALSAYRNL DGGYGNGLDP 
DLRGHTSQPA ATEIALRYLD DLGPIPTTLG TGICRYLTTV TNPDGGLPCV RPNVRHTEAA 
PWWQQHHDFT SDLGLTALLA GYLHKHNISH TWRDNATAYC WKRINALHWT DPHQAIGICT 
FLQHVPDRDR ALRTTSRLHP MIRAVIDTDP KPNPRRHAHT ALDIATHPDH IARPLFTDAE 
IQRNLDFFEQ TQRPDGGWDA TWQHWDTAAT LEREGMRTVQ RLRILCAYGR VQGYLPPRRR 
DT