Gene Ndas_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3140 
Symbol 
ID9246996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3756611 
End bp3757375 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRhomboid family protein 
Protein accessionYP_003681055 
Protein GI297562081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC TTCCGCTCAA TGACGACTAC CCCGTCCGCC GCGTCCCCGT CGTCTCGTAC 
ACGCTGGTCG CGGTCAACGT CCTCGTCTAT TTGGTGTCGC CGCAGGCGCT GACCGCGGTG
TGGTACCCGG CGGACATGTT CGAGCGCTTC TGCGCGATCC AGGACTACTT CATGTACTGG
GGGGCGGTGC CCGCCGAGAT CACGGGCCGG ACCGACCTGG TCCCGCACGC GGTCCCCGAG
TGCGGGCAGC TCGACGGCAA GCCGGTGTGG TTCTCGGTGT TCAGCTCGAT GTTCCTGCAC
AGCGGGCCCG GGCACCTGAT CGGCAACCTG GTGTACCTGT TCGTGTTCGG GCCCGTGGTG
GAGGACCGGA TCGGCAAGCT GCGCTTCACG GGGCTGTACC TGGCCACCGG GGTCGCCGCA
GCCTACGGCT TCGCGCTGAC CGACGTCGAC GCGGCCATGC CGATGGTGGG CGCGTCCGGG
GCCATCTCGG GCGTGCTGGG CGCCTACCTG GTCGTGCAGT TCCGCAGCCG GGTGACCACG
CTGGTGTTCG GGGTGATCCC GATGCGCCTG CCCGGGTGGG CCGTGGTGGG CAGCTACTTC
GCTCTTCAGT ATCTTCTCTA CGTCACCACA CCGAGCGCCC CCGGCGCCGG AGGCGGCGTC
GCCTACGCGG CGCACGTGTA CGGGTTCGTC GCGGGGGTGG TCGTGGGACT GGTGGTCTAC
CGGCTGCGGT GGCGCTCCGG GACGCGGCTG TCCGACGTCT ACTAG
 
Protein sequence
MAALPLNDDY PVRRVPVVSY TLVAVNVLVY LVSPQALTAV WYPADMFERF CAIQDYFMYW 
GAVPAEITGR TDLVPHAVPE CGQLDGKPVW FSVFSSMFLH SGPGHLIGNL VYLFVFGPVV
EDRIGKLRFT GLYLATGVAA AYGFALTDVD AAMPMVGASG AISGVLGAYL VVQFRSRVTT
LVFGVIPMRL PGWAVVGSYF ALQYLLYVTT PSAPGAGGGV AYAAHVYGFV AGVVVGLVVY
RLRWRSGTRL SDVY