Gene Ndas_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3099 
Symbol 
ID9246955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3710742 
End bp3711458 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content78% 
IMG OID 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_003681014 
Protein GI297562040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCACCGCGCC CTCCGCGCCC ATCGCCGTGG CGCTCGACGC CAGGGACCTG 
GAGACCGCGG CCACCTGGGC CTCAGCGGTC GCGCCGCACG TGAGCACGGT CAAGGTGGGC
CTGGAGCTGT ACCTGCGCTA CGGGCCCGAC GTGGTCAGCG CGGTGCGCGG GGCCAGCCGG
GTGGGGGTCT TCCTCGACCT GAAGCTGCAC GACATCCCGG CCACGGTCGC CGGCGCCGCG
CGCAGCGTCG CGGGCCTGCG GCCCTCGATC CTGACCGTCC ACGCCGGGGG AGGGGCGGAC
ATGGTCCGGG CCGCGGTGGA GGCCGCGCCG GAGACCAGGA TCGCCGCCGT GACGGTGCTC
ACCTCGATGG ACGAGGACGA CCTGGAGCAG GTGGGGCTGC TCGGTCCGGC CCGCGACGCG
GTGCGGCGCC TGGCGGTCCT GGCCGTGGGC GCCGGGGCCC GCGCGCTGGT CTGCTCACCC
CAGGAGGTGG CCCTGCTCCG CTCCGAGGTC GGACCGGACG TCACCCTCAT CACGCCGGGC
GTGCGCCCGG CGGGGGCGGA CAGGGGCGAC CAGTCGCGCG TGGCGACCCC GGAGGAGGCC
GTGGCGGCCG GCGCTGACCT GTTGGTCATC GGCCGCCCCA TCACCCGCGC GCCGGACCCG
GGGGCGGCGG CGGCCTCCCT CGCGGCGGCC GTGCGCCGGG CGGGTGTGCG CGTGTAG
 
Protein sequence
MTETTAPSAP IAVALDARDL ETAATWASAV APHVSTVKVG LELYLRYGPD VVSAVRGASR 
VGVFLDLKLH DIPATVAGAA RSVAGLRPSI LTVHAGGGAD MVRAAVEAAP ETRIAAVTVL
TSMDEDDLEQ VGLLGPARDA VRRLAVLAVG AGARALVCSP QEVALLRSEV GPDVTLITPG
VRPAGADRGD QSRVATPEEA VAAGADLLVI GRPITRAPDP GAAAASLAAA VRRAGVRV