Gene Ndas_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3093 
Symbol 
ID9246949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3704426 
End bp3705367 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content78% 
IMG OID 
Productconserved repeat domain protein 
Protein accessionYP_003681008 
Protein GI297562034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.13214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAG CAACGGCGGT GTCTGCGGTG GGGCTGGTGG CCCTGCTCGC CCTGCCCGGC 
GCCCACCACG CACCCGGCAA GTCGGGAGGC GGCGGAGGGG AGGTCGTGCC CGGCGCGGAC
AGCCTGCACG TGGCCCTGGA GTCCCGCGCC GAAGCGCGGC GGCCGGGCCC GGGCGACCGG
ATCCACTACA CGGTCAACGT GCGCAACGAC GGAGGCAAGG CGGTGCCTGA GGCCGAGATC
GTGCAGTTCC TCCCCCCGAC CGTGCGCTAC GTCTCGGGGA CGTCCGGGGC CGAGCCGGGG
GAGGGGCGGG TGACCTGGTC GCGGTCCCTG GAGCCCGGCG ACCGCGCGAG CATGCGTTTC
ACCGGCGAGA TCACCGCGGT CCGCGGCGGG GGAGAGCACC CGGTCGCCAC GGTCTGCGCG
CGCCCGGAGC CGGGAGCGGT GCTGGTCTCC TGTGACGCGG CCGTGCACCG CGTCCACGGA
GCGGTGCCGC CGGTGTGGGT GGTCACGGGA CTGGCCTTCG CGGCCTCGGT GGCGCTGTGC
GTCGGCGGCC TGGTGCGCCA CCGCGACACC CGGAACCGGT TGGAGGGGGA GCCCGGAGCG
GAGACGGTGC CCGCCCGCGC GAACGCCGAC GGAGCGGGGG AGGCCGCCGT GAGCGCGGCC
CGGGTGCCCG TCGGGACCGG ATCCGCCGCG GCGGAGGGGA CCGCCGACCG GCCGCGGACC
GTGCTGGAGA CGCTGGTCGT CCACAGGGCG GCGCCCGACC CCGTCCCCGT CACCGCGCGG
AGCGAGCGGG CGCACGGGCC GGACGCGGGG GAGACCGAAC CGCGAGAGGC GCACGAGTCC
GTACGCGTGC CCGACCCCGG GCCGGAGCCC GAGCCCGTAC CCGCCGAGAC CGCGCACGCG
CCCGCGGAGG AGCCCGAACC GGTCGCCGGG CCGCGCGGCT GA
 
Protein sequence
MAVATAVSAV GLVALLALPG AHHAPGKSGG GGGEVVPGAD SLHVALESRA EARRPGPGDR 
IHYTVNVRND GGKAVPEAEI VQFLPPTVRY VSGTSGAEPG EGRVTWSRSL EPGDRASMRF
TGEITAVRGG GEHPVATVCA RPEPGAVLVS CDAAVHRVHG AVPPVWVVTG LAFAASVALC
VGGLVRHRDT RNRLEGEPGA ETVPARANAD GAGEAAVSAA RVPVGTGSAA AEGTADRPRT
VLETLVVHRA APDPVPVTAR SERAHGPDAG ETEPREAHES VRVPDPGPEP EPVPAETAHA
PAEEPEPVAG PRG