Gene Ndas_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3090 
Symbol 
ID9246946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3699974 
End bp3701728 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content72% 
IMG OID 
Productaspartyl-tRNA synthetase 
Protein accessionYP_003681005 
Protein GI297562031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.904457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATACGCA CGCATGAGGC AGGTGCGTTG CGCGCCGAGC ACGCAGGCGC GACCGTCGTC 
CTCGCCGGGT GGGTGGCACG CCGCCGCGAC CACGGCGGGG TGGTCTTCCT CGACCTGCGC
GAGGCCTCCG GCGTGGTCCA GGTCGTCGTC CGCGAGGACG ACCTCGCCCA CGACCTGCGC
GCCGAGTACT GCATCAAGGT CACCGGCTCG GTCCGGGTCC GCCCCGAGGG CAACGAGAAC
CCCGAGATCC CCACCGGCGC GGTCGAGGTC GTCGCCGACG AGATCGAGGT GCTCAGCGAG
GCCGCGCCGC TGCCCTTCCA GCTCGACAGC GCCGCCGACG TGGCCGAGGA GACCCGGCTG
CGCTACCGCT ACCTGGACAT CCGACGCCAG GAGATGGCCG ACAACCTGCG CCTGCGCTCC
AAGGCGACCT ACGTCGCCCA CGAGGTCATG CGCGACCTGG GGTTCACCTA CGTGGAGACC
CCCTACATGA CCCGCTCCAC GCCCGAGGGC GCCCGCGACT TCCTCGTCCC GGTCCGCCTC
CAGCCGGGCC ACTGGTACGC GCTGCCGCAG TCCCCGCAGC TGTTCAAGCA GCTGCTCATG
GTCGGCGGCA TGGAGCGCTA CTACCAGCTC ACCCGCTGCT TCCGCGACGA GGACCTGCGC
GCGGACCGCC AGCCGGAGTT CACCCAGATC GACCTGGAGA TGAGCTTCGT CGACGAGGAG
GACCTCTTCG CCGTCGGCGA GAAGCTGTTC ACCCGCCTGC TGCGCGAGGT GCGCGGCGTC
GAGCTGCCCG AGCGCTTCCC GCGGATGCGC TACTCCGAGG CCATGGACCG CTTCGGCTCC
GACAAGCCCG ACCTGCGCTT CGGCCAGGAG CTGGTCGAGG TCACCGCCTA CTTCGCCGAC
ACCCCCTTCC GGGTCTTCAA GGCCCCCTAC GTGGGTGCCG TGGTCATGCC GGGCGGTGCC
TCCCAGACCC GCAAGGAGCT GGACGCCTGG CAGGAGTGGG CGCGCTCGCG CGGCGCGAAG
GGCCTGGCCT ACGTGCTCGT CCAGGAGGAC GGCTCCCTGG GCGGCCCGGT GGCCAAGAAC
CTCTCCGAGG CCGAGCGCGG GGGCCTGGCC GCCCAGGTCG GCGCCGCGCC GGGCGACGCG
GTGTTCTTCG CCGCGGGCGC CCGGACCGCG AGCCAGGAGC TGCTGGGCGC GGCCCGTCTG
GAGATCGGCA GGCGCTGCGG CCTGATCGAC ACCTCCCGGT GGGAGATCCT GTGGATCACC
GACATGCCCC TGTTCGAGGA GGCCGACGAG GAGGGCTCCT GGAAGCCGGT GCACCACCCC
TTCACCGCCC CGGCGGTGCA GGACGAGGCC GACTTCCAGG ACCACCCGGG CACCACCGAC
TCCCGGGCCT TCGACCTGGT GCTCAACGGC TACGAGCTGG TCTCGGGCTC CATCCGTATC
CACCGGGCCG AGATGCAGCA GCGGATCTTC GACGTCATCG GCCTGAGCAA GGCCGAGGCC
GAGTCGAAGT TCGGGTTCCT GCTGGAGGCG TTCAAGTTCG GCCCGCCGCC GCACGGCGGC
CTGGCCGTGG GCTGGGACCG CATCGTCATG CTGCTGGCCG GTCAGCCGAC CATCCGCGAG
GTCATCGCCT TCCCCAAGAC CGCCTCGGGC GGCGACCCGC TGACGGGCGC GCCCACGCCG
ATCACCGCTG AGCAGCGGGC CGAGGCCGGG GTGGACGCCG ACCCCGACGC CGAGGAGCGC
GAGAAGCGCA AGTAG
 
Protein sequence
MIRTHEAGAL RAEHAGATVV LAGWVARRRD HGGVVFLDLR EASGVVQVVV REDDLAHDLR 
AEYCIKVTGS VRVRPEGNEN PEIPTGAVEV VADEIEVLSE AAPLPFQLDS AADVAEETRL
RYRYLDIRRQ EMADNLRLRS KATYVAHEVM RDLGFTYVET PYMTRSTPEG ARDFLVPVRL
QPGHWYALPQ SPQLFKQLLM VGGMERYYQL TRCFRDEDLR ADRQPEFTQI DLEMSFVDEE
DLFAVGEKLF TRLLREVRGV ELPERFPRMR YSEAMDRFGS DKPDLRFGQE LVEVTAYFAD
TPFRVFKAPY VGAVVMPGGA SQTRKELDAW QEWARSRGAK GLAYVLVQED GSLGGPVAKN
LSEAERGGLA AQVGAAPGDA VFFAAGARTA SQELLGAARL EIGRRCGLID TSRWEILWIT
DMPLFEEADE EGSWKPVHHP FTAPAVQDEA DFQDHPGTTD SRAFDLVLNG YELVSGSIRI
HRAEMQQRIF DVIGLSKAEA ESKFGFLLEA FKFGPPPHGG LAVGWDRIVM LLAGQPTIRE
VIAFPKTASG GDPLTGAPTP ITAEQRAEAG VDADPDAEER EKRK