Gene Ndas_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3065 
Symbol 
ID9246921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3662340 
End bp3664826 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content75% 
IMG OID 
Productphenylalanyl-tRNA synthetase, beta subunit 
Protein accessionYP_003680981 
Protein GI297562007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCC CCCTGAGCTG GCTGCGGGAG TACGTCGACC TTCCGGTCGG CACCACCGCC 
CGCGAACTCG CCGGCCGCCT CACGCTGGCG GGCCTGGAGG TCGAGACCGT CGACGAGCTC
GGCTCCGACA TCACCGGCCC CATCGTGTAC GGCCGCGTGC TGGAGATCGA GGAGCTGACC
GGGTTCAAGA AGCCCATCCG CTACTGCCGG GTGGACGTGG GCGGGGCCAA CGGCACCGGA
GAGCCGCAGG AGATCGTCTG CGGCGCCCGC AACTTCTCCG AGGGCGACCT GGTCGTGGTC
TGCCTGCCCG GCGCCGAACT GCCCGGCGGC TTCCGGATCG GCGCCCGCAA GACCTACGGC
CGGATGTCGG CGGGCATGAT CTGCTCGGCC AGCGAGCTGG GCCTGTGGGA GGACCACAGC
GGCATCATCG TGCTGCCCGA GGGCTTCGGC GCGGTGGGCG AGGACGCCAT CGGGCCGCTC
GGCCTGCGCG AGGACGTCCT GGACATCGCC GTCACGCCCG ACCGCGGCTA CGCGCTGTCC
CTGCGCGGCG TGGCCCGCGA CGCCGCCGCG CTGTACGGGG TGGACTTCCA CGACCCGGCC
GACGTCGCCG TCGCCGAGTC CGGCGGCGAG GGCCACCCCG CCGAGATCGA CCCGGCCCTG
TGCGACCGCT ACGTCCTGCG CGGCGCCACC GGGTTCGACC CCGACGCGCC CAGCCCGCTG
TGGATGAAGC GCCGCCTGCA CCAGTGCGGC GTGCGCCCCA TCTCCCTGGC CGTCGACGTC
ACCAACTACG TGATGCTCGA ACTCGGCCAG CCGCTGCACG CCTGGGACCG CGCCCAGCTG
CGGGGGGCCC TGCGGGTGCG CGCCGCCGAG GCGGGGGAGA AGCTGGAGAC CCTGGACCAC
GTCCAGCGCT CCCTGGACAC CGACGACATC GTCATCGCCG ACGACAGCGG CCCGGTCAAC
ATCGCCGGGG TCATGGGCGG CCTGACCACG GAGATCTCCC TGACCAGCAC CGAGGTGCTG
GTCGAGGCCG CGCACTTCGA CGCCATGCAC ATCGCCCGCG CCTCGCGGCG CCACCAGCTG
TCCTCGGAGT CCTCCCGCCG CTTCGAGCGG GGCGTGGACT CGGCCGTGCA GCTGGCCGCC
GCCACACGCG CGGTCGAACT GCTCGCGGAG TTGGGCGGCG CCACCGTCGA GACCGCCTAC
ACCCACCTGG ACCGCACCGC CGCGCGCGAG CCGGTCACGG TACGGGCCTC CCACGCGGGC
GCCGTCGCCG GGGTGGACTA CCCCGAGGGC ACCACGCAGC GCTGGCTGCG CGCCGTCGGC
TGCGAGGTGG AGGCCGACGG GGACCTGCTG AGGGTCGTTC CGCCCAGCTG GCGACCCGAC
ATCACCGACC CCAACGACCT CGCCGAGGAG GTCATCCGCT TCGAGGGTTA CGAGAACATC
CCCTCGATCC GCCCGCGCGC CTCGGGCCGC GGCCTGACCG CGAGCCAGCG TCTGCGCCGC
GCGGTCGGCC GCGCCCTGGC CGGGACCGGC TTCCACGAGG TGCTGAACTA CCCCTTCGTC
GGTGAACGCG ACCTCGACGG CCTCCAGTTG GCGGCCGACG ACGACCGCCG CGACGCCCTG
CGCCTGGCCA ACCCGCTCAA CGAGGGCGAG CCGCTGCTGC GCACCACGCT GCTGCCGGGG
CTGTTCAAGG CGCTGGCCCG CAACACGGGC CGCGGGTTCA CCGACGTGGC CCTGTACGAG
ACGGGCCTGG TCTACCGGCC CAGGCCCGGC GCCCCCCGCG CGCCCATGCT CGCGGTGGAC
CGCGGGCCCG ACGCCGAGGA GCTGGCCCGG ATCGAGGCGG CCCTGCCGGA CCAGCCGCGC
CGGGTGGGCG CGGTGATCTC CGGCCACGCC GAACGCGCCG GATGGTGGGG CCCGGGCCGG
GAGGCCGGCT GGGCCGACGC GGTCCAGACC GCGCGCGACG TCGCCCGCGT GGCGGGGGTC
GAGCTGGAGG TCGAGGCCGA CCAGCACGCC CCGTGGCACC CGGGCCGCTG CGCCGCGCTG
TACGTGCGCG TGGACGGGGA GCGCCTGCTC GTGGGCCACG CCGGAGAGCT GCACCCGCGC
ACCGTCCAGG CCTTCGGGCT GCCCGAGCGC ACGGCCGCCG TGGAGGTCGA ACTCGACCGG
ATCGAGCGGG CCCGCACCCC GGTCACCGCG CCGGAGATCT CCACGTACCC GGTGGCCACG
CAGGACGTGG CCCTGGTCGT GGACTCCTCG GTGCCGGTCG GGCGGGTCAG CGCCGCGCTG
GCCGAGGGCG CCGGTGAACT GCTGGAGAGC GTGCGCCTGT TCGACGTCTA CACCGGCGAC
CAGGTCGGCG AGGGCAGCAA GTCGGTGGCC TTCGCCCTGC GCTTCCGGGC CGCCGACCGG
ACGCTGACGG CGGAGGAGGC CGGAGCGGCC CGCGACGCGG CCGTCGCCCT GGCGACCGAG
CGCACGGGTG CCGTCCTGCG CGGCTGA
 
Protein sequence
MRVPLSWLRE YVDLPVGTTA RELAGRLTLA GLEVETVDEL GSDITGPIVY GRVLEIEELT 
GFKKPIRYCR VDVGGANGTG EPQEIVCGAR NFSEGDLVVV CLPGAELPGG FRIGARKTYG
RMSAGMICSA SELGLWEDHS GIIVLPEGFG AVGEDAIGPL GLREDVLDIA VTPDRGYALS
LRGVARDAAA LYGVDFHDPA DVAVAESGGE GHPAEIDPAL CDRYVLRGAT GFDPDAPSPL
WMKRRLHQCG VRPISLAVDV TNYVMLELGQ PLHAWDRAQL RGALRVRAAE AGEKLETLDH
VQRSLDTDDI VIADDSGPVN IAGVMGGLTT EISLTSTEVL VEAAHFDAMH IARASRRHQL
SSESSRRFER GVDSAVQLAA ATRAVELLAE LGGATVETAY THLDRTAARE PVTVRASHAG
AVAGVDYPEG TTQRWLRAVG CEVEADGDLL RVVPPSWRPD ITDPNDLAEE VIRFEGYENI
PSIRPRASGR GLTASQRLRR AVGRALAGTG FHEVLNYPFV GERDLDGLQL AADDDRRDAL
RLANPLNEGE PLLRTTLLPG LFKALARNTG RGFTDVALYE TGLVYRPRPG APRAPMLAVD
RGPDAEELAR IEAALPDQPR RVGAVISGHA ERAGWWGPGR EAGWADAVQT ARDVARVAGV
ELEVEADQHA PWHPGRCAAL YVRVDGERLL VGHAGELHPR TVQAFGLPER TAAVEVELDR
IERARTPVTA PEISTYPVAT QDVALVVDSS VPVGRVSAAL AEGAGELLES VRLFDVYTGD
QVGEGSKSVA FALRFRAADR TLTAEEAGAA RDAAVALATE RTGAVLRG