Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3058 |
Symbol | |
ID | 9246914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3653855 |
End bp | 3655063 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | acetylornithine and succinylornithine aminotransferase |
Protein accession | YP_003680974 |
Protein GI | 297562000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00328868 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAACG GTTCCCACCT GCGCGAGCGC TTCGCCGCCT CGCTCATGCC CACCTACGGC GTCCCGCCCA TCGCCCTCAC CCTCGGGCGC GGCTGCGAGG TCTACGACGC CGACGGCCGC CAGTACCTCG ACCTCATCGC CGGGATCGCC GTCTCCAGCC TCGGACACGG GCACCCCGCA CTGGTCAAGG CGGTCGCCCA CCAGGCGGCC ACGCTCGCCC ACACCAGCAA CCTGTTCGTC CACGAACGCG AGGTCCAACT CGCCGAGCGC CTGATCGGCC TCGTGGGCGG CGACGCCAAG GTCTTCTTCA CCAACTCCGG CACCGAGGCC AACGAGGCCG CGCTCAAGCT GGTCAAGCGC GCCGCCGGGC CCGGCCGCCA CTACTTCGTC GCCGCGTCCC ACGGCTTCCA CGGCCGCACC TCCGGCGCCC TCGCCCTCAC CGGCAAGGAG GCCATCCGCG AGCCCTTCGG CCCCTTCGGC ATGGACGTGC GCTTCGTGCC CCACGGCGAC CTGGACGCCC TCGCCGACGC CGTCGACGAG CACTGCGTCG CGGTGTTCAC CGAACCCACC CAGGGCGAGG CCGGGGTCGT CCCCGCCCCC GAGGGGTACC TCGCCGGGGT CCGGCGGATC TGCGACGACA CCGGCGCCGC CTTCGTCCTC GACGAGATCC AGAGCGGCAT CGGCCGCACC GGCCTCTGGT TCGCCCACCA GGCCGAGGAC GTGCGCCCCG ACGTGCTCAC CCTCGCCAAG GGCCTGGGCG GCGGCCTGCC CATCGGCGCC TGCGTCGGCT TCGGCCGCTA CGCCGACGCC TTCGCCAAGG GCGACCACGG CTCCACCTTC GGCGGCAACC CGGTGGCCTG CGCGGCGGCC CTCGCCGTCC TCGACACCAT CGAGAGCGAG AACCTGCTCG CCCACACCGC GGTCATGGGC GACCTGCTCG CCGAGCAGCT CGACACCATC GACCACCCCC TGCTGGCCGG ACAGCGCGGC AGCGGACTGT GGCGGGCCCT GGAGCTCACC GCGCCGCACG CCGCCCACGT GCAGGAACAG GCGGCCGTCC GCGGCTTCCT CGTCAACGCC GTGGCGCCGC ACGCGATCCG GATCGCCCCG CCCCTGGTCA TCACACCCGA ACAGATCGGC CTGTTCATCG AGGCGCTGCC CACCATCCTG GACGCAGCCG AGGCCGCAGC GACGAAGGAG CAGCAGTAG
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Protein sequence | MTNGSHLRER FAASLMPTYG VPPIALTLGR GCEVYDADGR QYLDLIAGIA VSSLGHGHPA LVKAVAHQAA TLAHTSNLFV HEREVQLAER LIGLVGGDAK VFFTNSGTEA NEAALKLVKR AAGPGRHYFV AASHGFHGRT SGALALTGKE AIREPFGPFG MDVRFVPHGD LDALADAVDE HCVAVFTEPT QGEAGVVPAP EGYLAGVRRI CDDTGAAFVL DEIQSGIGRT GLWFAHQAED VRPDVLTLAK GLGGGLPIGA CVGFGRYADA FAKGDHGSTF GGNPVACAAA LAVLDTIESE NLLAHTAVMG DLLAEQLDTI DHPLLAGQRG SGLWRALELT APHAAHVQEQ AAVRGFLVNA VAPHAIRIAP PLVITPEQIG LFIEALPTIL DAAEAAATKE QQ
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