Gene Ndas_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3042 
Symbol 
ID9246898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3637811 
End bp3638419 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003680958 
Protein GI297561984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.578311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAGGG CGGGGTTGAC CCCGGCGGTG GTGGCCGAGG AGGCGGCGCG GCTCAGCGAT 
GAGGAGGGGT TCGACTCCCT GTCCCTGGCC GCGGTCGCCA AGCGGCTCGG AGTGGCCACG
CCCAGCCTGT ACAAGCACGT GGACGGGCTG ACGGGACTGC GCCGGGAGGT GGCGCTGCTG
GGCGCGAACG GGATCGGCGA GGAGGTGCAG CGCGCCGCCG TGGGCCGGTC CGGCCCGGAG
GCGCTGCGCG CGACGGCCGA CGCCTACCGC CGCTACGCGC ACGCCCACCC GGGGCACTAC
GCGGCCCTGC AACAGCTGCC GGTGCTGGCC GGGGCCAGGG CCGAGCTGGC CACCGACCCG
GTACGGGTCC TGGCCGCCGT CCTGCGCGGG TTCGGCATCG CCGAGGAGCA GGCCGTGCAC
GCGATCCGGG CGCTGCGCAG TTCGCTGCAC GGGTTCGTGG ACCTGGAGAC ACGCGGCGGC
TTCGGCCTGC CCGAGGACGT GGACCAGTCC TACGCGCTGC TGGTGGAGGG GTTCGTCCGC
GCCTTCCAGG AGTGGCCGGA CACGGTGCCC GGCGCGGCTG GGGCACACGA GGACACGGGG
AGGGGGTAG
 
Protein sequence
MPRAGLTPAV VAEEAARLSD EEGFDSLSLA AVAKRLGVAT PSLYKHVDGL TGLRREVALL 
GANGIGEEVQ RAAVGRSGPE ALRATADAYR RYAHAHPGHY AALQQLPVLA GARAELATDP
VRVLAAVLRG FGIAEEQAVH AIRALRSSLH GFVDLETRGG FGLPEDVDQS YALLVEGFVR
AFQEWPDTVP GAAGAHEDTG RG