Gene Ndas_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3040 
Symbol 
ID9246896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3635421 
End bp3636719 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content70% 
IMG OID 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_003680956 
Protein GI297561982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.485663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA TCATCGACGA ACTCCAGTGG CGCGGCCTGC TCGCGCAGAC GACCGACCTT 
GACGCACTGC GCAAGGCGCT CGCCGATGGT CCGATCACCC TGTATTGCGG ATTCGACCCG 
ACGGCGGGCA GCCTGCACGT GGGCCACCTC ACCCAGATCC TGACCCTGGC CCGTTTCCAG 
CAGGCAGGCC ACCGCCCGAT CGCGCTGGTC GGCGGCGGTA CCGGTCTCAT CGGCGACCCC 
AAGCCCAACG CCGAGCGCCA GCTCAACTCG CTGGAGACCG TGCGGGGCTG GGTCGACAAC 
CTGGGCGGGC AGCTGTCCGC GTTCCTGCGC TTCACCCCCG AGGGGGAGCA GCCGGAGCCC 
ACCGACGCCG TCCTGGCCAA CAACGCCGAC TGGCTCGGCG AGATCAACGC CATCGAGCTG 
CTGCGCGACG TCGGCAAGCA CTTCAGCGTC AACCAGATGC TCGCCCGGGA GACGGTGAGG 
AGCCGGCTCG ACGGTGAGGG CATGAGCTAC ACCGAGTTCA GCTACGTGCT CCTGCAGTCC 
TACGACTACG TCCAGCTCTA CCGCCGCTTC GGCTGCACGC TGCAGACCGG CGGCTCCGAC 
CAGTGGGGCA ACATCACCGC GGGCCTGGAC CTGGTCCGCA GGATGGACGG AAACGAGCCG 
CACGGCCAGG CGCACGGGCT GACCACGAAC CTGCTCACCA AGGCCGACGG CACCAAGTTC 
GGCAAGACGG AGTCCGGCAG CGTCTGGCTC GACCCCGAGC TGACCTCGCC GTACGCCTTC 
TACCAGTTCT GGTTCAACGC CGACGACCGA GACGTGGTCC GCTACCTGAA GACCTTCAGC 
TTCCGCGACC GCGACGAGAT CGAGGAACTG GAGCGCCAGA CCGAGGAGCG TCCGCAGGCC 
CGCGCCGCCC AGCGCGTCCT GGCCGAGGAC CTCACCGTCC TCGTGCACGG CGAGGAGGAG 
TGCCGCAAGG TCAAGGAGGC CAGCCTGGCC CTGTTCGGCC GCGCGGACCT GTCCGACCTG 
GACGCCCGCA CGCTGGAGGC CGCCCTGGCC GAGGTTCCCC GGGCCGAGGT CGACGGTCCC 
GTCGACGGGC TGCTGGTGAC CGACGCGTTC GCGCGGAGCG GCCTGACGCC GAGCAAGTCC 
GCGGCCCGCC GCGCCATCCA GGAGGGCGGG GCCTACGTGA ACAACGTCAA GGTCACCGAC 
GTGGAGGCCG TGCTCCGCCC CGAGGACGTG CTCCAGGGAC GCTTCGTCGT GCTGCGCAAG 
GGCAAACGCA ACATCGGCGG CTTGGTCCTC AACGGCTGA
 
Protein sequence
MTDIIDELQW RGLLAQTTDL DALRKALADG PITLYCGFDP TAGSLHVGHL TQILTLARFQ 
QAGHRPIALV GGGTGLIGDP KPNAERQLNS LETVRGWVDN LGGQLSAFLR FTPEGEQPEP 
TDAVLANNAD WLGEINAIEL LRDVGKHFSV NQMLARETVR SRLDGEGMSY TEFSYVLLQS 
YDYVQLYRRF GCTLQTGGSD QWGNITAGLD LVRRMDGNEP HGQAHGLTTN LLTKADGTKF 
GKTESGSVWL DPELTSPYAF YQFWFNADDR DVVRYLKTFS FRDRDEIEEL ERQTEERPQA 
RAAQRVLAED LTVLVHGEEE CRKVKEASLA LFGRADLSDL DARTLEAALA EVPRAEVDGP 
VDGLLVTDAF ARSGLTPSKS AARRAIQEGG AYVNNVKVTD VEAVLRPEDV LQGRFVVLRK 
GKRNIGGLVL NG