Gene Ndas_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3027 
Symbol 
ID9246880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3616731 
End bp3617531 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content74% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003680943 
Protein GI297561969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.252097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC GCACCCGGCT CGACGCGGAA CTGGTCCGCC GCGGGCACGC ACGCTCCCGT 
GGACACGCCG CCGAGATCAT CGAGGGCGGG TTCGTCAAGG TCGCGGGGAT CGTGGCCTCC 
AAGGCCGCGA CCCAGGTCGG CCAGGACCAG CCCATCGTGG TCCGTCCACC CTCCGACGAG 
CCCCCCTACG TCTCCCGCGG CGCCCACAAG CTCATCGGGG CCCTCGACGC CTTCGAGTTC 
GACGTCGCCG ACCGCAGGGC CCTGGACGCG GGCGCCTCCA CCGGCGGGTT CACCGACGTG 
CTGCTGCGCC GCAGGGCGGC CCACGTCACC GCGGTGGACG TGGGCTACGG CCAGCTCGCC 
TGGTCGCTGC GCAGCAACGA CCGCGTGCGC GTGATGGAGC GGGTCAACGT CCGTGAGCTC 
ACCCCCGAGC AGATCGGCGA GCCCCGCCCC GACCTGGTCG TGGGCGACCT GTCGTTCATC 
TCGCTGCGCC TGGTGCTGGG GGCGCTGCGG GGCTGCGTGG CCGCCGACGC CGACTTCCTG 
CTCATGGTCA AGCCCCAGTT CGAGGTGGGC AAGGACAAGG TCGGCGCCGG GGGAGTGGTC 
CGCGAGCCGG AGCTGCGCGC CGAGGCCGTC TCCGACGTCG CCGCGCACGC CCTCACCCTG 
GGGCTGGGCA CCGTCGGCGT CACCGCCAGC CCCCTGCCGG GCCCCTCCGG CAACGTCGAG 
TACTTCCTGT GGATGCGCGC GGGGGCCGCG CCCCTGGACC CGGACGCGTT GGCCCGGGCC 
GTGGAGGAGG GACCGCGTTA G
 
Protein sequence
MAKRTRLDAE LVRRGHARSR GHAAEIIEGG FVKVAGIVAS KAATQVGQDQ PIVVRPPSDE 
PPYVSRGAHK LIGALDAFEF DVADRRALDA GASTGGFTDV LLRRRAAHVT AVDVGYGQLA 
WSLRSNDRVR VMERVNVREL TPEQIGEPRP DLVVGDLSFI SLRLVLGALR GCVAADADFL 
LMVKPQFEVG KDKVGAGGVV REPELRAEAV SDVAAHALTL GLGTVGVTAS PLPGPSGNVE 
YFLWMRAGAA PLDPDALARA VEEGPR