Gene Ndas_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3024 
Symbol 
ID9246877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3612528 
End bp3613742 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content72% 
IMG OID 
ProductThiamin pyrophosphokinase catalytic region 
Protein accessionYP_003680940 
Protein GI297561966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.468462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.163552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA TGAAGGTATC GGATGCGCTC AGCGCCACAG TCATGCGGTT CCGCCGCACC 
CGGGCGGACG CTCCCACAGG GCTGATCGCG CCCGTCCGCT CGGACCGGCG CACCAAGAAC
CTGACCAAAC GTCTGCGACC GGGCGACATC GCGGTCATCG ACCACGTCGA CCTGGACCGC
GTCAGTGCCG AGGCCCTGGT GGGCTGCGGT GTGTCCGCGG TCCTCAACGT CGCCACGAGC
ATCAGCGGCC GCTATCCCAA CCAGGGGCCG GAGATGATCG TGGACGCGGG GATCCCCCTG
GTCGACGACG TCGACCCCGA GGTGTTCACC CGCGTCCGCG ACGGCGAGCG GCTCCGCCTG
GAGGGCGCCA CCCTGTACCG CGGCGACGAG GTCGTCGCGC GCGGCACCCT CCAGGACCTG
GGGACCGTCA GCGCGGCGAT GGAGGAGGCC CGCGCGGGGC TGGCCACACA GTTGGAGGCC
TTCGCGGCCA ACACCATGGC CTACCTCCAG CACGAGCGCG ACCTGCTCCT GGACGGCATC
GGCATCCCCA CCATCGAGAC CGACATCGAG GGCCGCCACG TCCTCATCGT GGTCCGCGGC
TACCACTACC GGGAGGACAT CGCGGCGCTG CGGCCCTACA TCCGCGAGTT CCGGCCGGTC
ATCATCGCCG TGGACGGCGG GGCGGACGCG GTCATGGAGG CGGGGTACAA GCCTGACATC
ATCGTCGGCG ACTTCGACTC GGTCTCGGAC CGGGCGCTGA CCAGCGGGGC CGAGCTGGTC
GTGCACGCCT ACCGCGACGG CAGGGCCCCG GGCCTGCCCA GGCTCACCGA CCTGGGGCAC
GGCGCGGTGG TCTTCCCCGC CACGGGCACC AGCGAGGACG TGGCGATGAT GCTCGCCGAC
GGCGCGGGCG CCGCGCTCAT CGTGGCCGTG GGCACCCACG CCACCCTGGA GGAGTTCCTC
GACAAGGGCC GGGCGGGGAT GGCCAGCACC TTCCTGACCC GGCTGCGGGT GGGCGGCAAG
CTCGTCGACG CCAAGGGCGT CAGCCGCCTG TACCGCTCGC GCATCTCCCC CTGGGCCCTG
CTCGGGCTGG TCGCGGCCTG CCTGCTCACC ATCGTGGTCG CCGCCTACAG CTCACCGGCG
GGCCAGGTCT ACCTCACCTT TCTCGCGGCG CGCTGGGACG CGTTCTCCTA CTGGTTGACA
GGGCTGTTGA CGTGA
 
Protein sequence
MPAMKVSDAL SATVMRFRRT RADAPTGLIA PVRSDRRTKN LTKRLRPGDI AVIDHVDLDR 
VSAEALVGCG VSAVLNVATS ISGRYPNQGP EMIVDAGIPL VDDVDPEVFT RVRDGERLRL
EGATLYRGDE VVARGTLQDL GTVSAAMEEA RAGLATQLEA FAANTMAYLQ HERDLLLDGI
GIPTIETDIE GRHVLIVVRG YHYREDIAAL RPYIREFRPV IIAVDGGADA VMEAGYKPDI
IVGDFDSVSD RALTSGAELV VHAYRDGRAP GLPRLTDLGH GAVVFPATGT SEDVAMMLAD
GAGAALIVAV GTHATLEEFL DKGRAGMAST FLTRLRVGGK LVDAKGVSRL YRSRISPWAL
LGLVAACLLT IVVAAYSSPA GQVYLTFLAA RWDAFSYWLT GLLT