Gene Ndas_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3008 
Symbol 
ID9246861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3591323 
End bp3592099 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID 
Producttriosephosphate isomerase 
Protein accessionYP_003680924 
Protein GI297561950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0301778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC GCCTGCCGCT CATCGCGGGC AACTGGAAGA TGAACAACAA CCACCTGGAG 
GCGATCGCGC TCGTCCAGAA GCTGGCGTTC GCGCTCAACG ACAAGGACTA CGACAAGGCC 
GAGGTCGTCG TCCTGCCGCC GTTCACCGAC CTGCGCAGCG TCCAGACCCT GGTCGACGGC 
GACAAGCTCA AGATCGTCTA CGGCGCCCAG GACATCTCCG CGCACGAGAA GGGCGCCTAC 
ACCGGCGAGA TCTCCGGGTC CATGCTGGCC AAGCTGGACT GCTCCTACGT GCTGGTGGGC 
CACTCCGAGC GCCGCGAGTA CCACCGCGAG GACGACGCCC TGGTCAACAC CAAGGTCAAG 
GCGGCGTTCG CCAACGGCAT CGTCCCGATC CTGTGCGTGG GCGAGGGCCT GGAGGTCCGC 
AAGGCGGGCC AGCAGGTCGA GCACGTCCTG GCCCAGTTGG ACGGCGCCCT CAAGGAGGTC 
CCGGCCGAGC AGGCCGAGAG GATCGTCGTC GCCTACGAGC CCGTGTGGGC CATCGGCACC 
GGCGAGGTCG CCACCCCCGA GGACGCCCAG GAGGTGTGCT CGGCCGTCCG CGCGCGCCTG 
GCCGAGCTGT ACTCGCCCGA GGTCGCGGGC GCGGTGCGCG TCCTCTACGG CGGTTCGGTC 
AAGGGCGACA ACGCCCCCGG CATCATGGCC AAGGACGACG TGGACGGGGC CCTGGTCGGC 
GGCGCCTGCC TCAAGGCCGA CGAGTTCGTG AAGATCATCC GCTTCGGCGA CAACTAG
 
Protein sequence
MSQRLPLIAG NWKMNNNHLE AIALVQKLAF ALNDKDYDKA EVVVLPPFTD LRSVQTLVDG 
DKLKIVYGAQ DISAHEKGAY TGEISGSMLA KLDCSYVLVG HSERREYHRE DDALVNTKVK 
AAFANGIVPI LCVGEGLEVR KAGQQVEHVL AQLDGALKEV PAEQAERIVV AYEPVWAIGT 
GEVATPEDAQ EVCSAVRARL AELYSPEVAG AVRVLYGGSV KGDNAPGIMA KDDVDGALVG 
GACLKADEFV KIIRFGDN