Gene Ndas_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2900 
Symbol 
ID9246751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3465824 
End bp3468205 
Gene Length2382 bp 
Protein Length793 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003680817 
Protein GI297561843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.366877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.180357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CCGTCATCAT CATCATCGCC GTCATCGTCG TGCTCGCCGT GCTCGTGCTC 
CTGCTGCTGG GCATGCGCGC GCTGAGCTCC GGCTCCCGCG AGGACGACTA CGACGACGAG
TACGAGCACG AGGACGCCGA GGGCGACGAC CGCGACGAGG AACGGCCGCG CGGTCGCGGA
CGCGGCCGGG AGCGGGCCCG CGACGGGGGC CGGGGACGCG GCGGGAGCCG GGGTCGCGAC
CTCGACGAGG ACGAGGACGA GGACGACGGG GAACCGGAGC CGCGCGGACG CGGCCGCAGG
TCCCGTCAGG GCGACGGCGC CAAGGCGGAG CGGCGGCCCC GGGGCAGGCG CAAGCTCGAC
GCGGACTGGG ACGACGATGA CGACTCCCTG TCCGACAACG ACTTCTGGTC GAGCCTGGGC
GAGGACGGCC CGGCGCAGCG GCCCTCCGGT GCGCGGGACG GGCGCGGGGA CCGGGACTCC
GCCGTCACCG TGACCGCCCA CGAGTACGAG GACGACGACT ACGACGACGG GTACGGGGAG
TACGAGGACG AGGAGGCCTC CGGACCCCCC GGAGCCACCA CGGTCATGCC CGCCGCGGGA
GGCCGCGGGA GCGGCGACCC CTCCGCCGAC CTGGCCGTGC TGGCCAGCCT GGGCCAGGGC
AGCGGGCCCC AGCCGGTGGA GGAGGACGGG GAGGAGCCGT CGCGGGGCCG GGGCCGCAGG
CGGCGCGGGG CCGAACCGGT CGGCGAGGAC GAGCGCGCCC TGCCGCCGGG GGCTCCGCCG
CGTTCCGCGC TTCCCCCCGC GCGGGAGGCC ACGCCCCCGC AGGGCGTCCC CCAGCCCTCC
CAGCCCGCCG CACCGGCCGC CTCGGCCTCA GACGACCCCC TGGGCACCGG TTCGTGGTCT
CCCCGTTCCT CCTACTCGCC CTCCTCGACC GATCCGCTGG GGTCCTCGTC CGGCACGCAC
GACCCGCTGG GATCCTCATC CGGCACGCAC GACCCGCTGA GGACCTCCTC CGGGCTCGAC
CCGCTCGGCG GGTCCGGTTC CGTCCCGTCC GCGGGTGACC CGTTCCAGGG CCGCTCCTCC
TACGACAGCG GGTCGATGAG CCGCTCGGAC TACCCGGGAA CGGCCGGTGC GCGCAGCGCG
TCCCCCGCCG ACCCGCTCGA CCCGGCCTTC CAGCGTCCGG CCCCGGGCAC CGGCACGAGT
TCGCCGATAT GGTCCAGCAT GGACACCGGC GCGCACCAGC GCTCCGAGCT CGGCTTCGGC
GGCGGTCAGG GCGGCGCGGG TACGGGTCAG ACGTCCCCGG GCGGCGCGGG TGATCCCGCC
GACCCCCTGG GCGGTGGTTA CCGGTCGCGG CCGGAGACGT CCCACACCAC GGGGACCCAC
CAGCGCTCGG CCTACGACAC GGGGTCCCAC CAGCGTTCGT CCTACGACAC CGGAGCGCAC
CAGCGGTCCT CCTACGACAC GGGCGCCCAC AGCCACGCCG ACTACGGCAT GCCCGGCACC
GGACGACCCG AGTACGACAC CGGCAACCAC ACCCGCCCCT CCTACGACAC CGACTCCTTC
AACCGCAACG ACTACGACAC CGGAACCCAC CACCGCTCCC CCTACGACAC GGGGTCCCAC
CAGCGTTCGT CCTACGACAC CGGGGCCCAC CAGCGGTCCT CCTACGACAC GGGCGCCCAC
AGCCACGCCG ACTACGGCAT GCCCGGCACC GGACGACCCG AGTACGACAC CGGCAACCAC
ACCCGCCCCT CCTACGACAC CGACTCCTTC AACCGCAACG ACTACGACAC CGGAACCCAC
CACCGCTCCC CCTACGACAC CGGCGCCCAC AGCCGCCCGG CCCAGCCGGA CCCCAACCCC
CCGCTGTGGG GTCCGCAGGA GGACGGCGGC GCCTTCGGGG CCCCGGGCGT CCACGGCGGC
CCCGGCGCGG CGGCCTTCCC GGGCGGGAGC GCGGTCACCG GGGCCCCGGA GCCTCCGGCG
CCGTTCGACC AGGGGCCGGT CGGCCAGCCC GCCTACCCGT CCGCGTTCCC GGGTGAGGCT
CCCGGGTACC CGCAGGGCGG TTACCCGACG GGCGGCTATC CGGTGGACCA GGTGCGCGGG
GACGCCCCGG CGGGCTACGG CGAACAGGCC CCGTTCGGCT ATCCGGCCGG GGGCGCCGGC
GGCTATCCCG GTGTCCCGGG CGGCTACCCG TCCGGCGGAC AGCCCCAGCA GCCGCAGCAG
CCCGGCTACG GCGGCTTCCC GCCCGCGCCG GACTGGCAGT CCGGCGACGA GGAGCGGCGC
CCCGGCGGGC CGCAGGCGCC GGAACCGTAC CCGTCCGACC CCCGCGACCC GCACGGCCGC
AACCGCTACG AGGGCGGGTA CGAGGACGGC CGCTTCATCT GA
 
Protein sequence
MTVTVIIIIA VIVVLAVLVL LLLGMRALSS GSREDDYDDE YEHEDAEGDD RDEERPRGRG 
RGRERARDGG RGRGGSRGRD LDEDEDEDDG EPEPRGRGRR SRQGDGAKAE RRPRGRRKLD
ADWDDDDDSL SDNDFWSSLG EDGPAQRPSG ARDGRGDRDS AVTVTAHEYE DDDYDDGYGE
YEDEEASGPP GATTVMPAAG GRGSGDPSAD LAVLASLGQG SGPQPVEEDG EEPSRGRGRR
RRGAEPVGED ERALPPGAPP RSALPPAREA TPPQGVPQPS QPAAPAASAS DDPLGTGSWS
PRSSYSPSST DPLGSSSGTH DPLGSSSGTH DPLRTSSGLD PLGGSGSVPS AGDPFQGRSS
YDSGSMSRSD YPGTAGARSA SPADPLDPAF QRPAPGTGTS SPIWSSMDTG AHQRSELGFG
GGQGGAGTGQ TSPGGAGDPA DPLGGGYRSR PETSHTTGTH QRSAYDTGSH QRSSYDTGAH
QRSSYDTGAH SHADYGMPGT GRPEYDTGNH TRPSYDTDSF NRNDYDTGTH HRSPYDTGSH
QRSSYDTGAH QRSSYDTGAH SHADYGMPGT GRPEYDTGNH TRPSYDTDSF NRNDYDTGTH
HRSPYDTGAH SRPAQPDPNP PLWGPQEDGG AFGAPGVHGG PGAAAFPGGS AVTGAPEPPA
PFDQGPVGQP AYPSAFPGEA PGYPQGGYPT GGYPVDQVRG DAPAGYGEQA PFGYPAGGAG
GYPGVPGGYP SGGQPQQPQQ PGYGGFPPAP DWQSGDEERR PGGPQAPEPY PSDPRDPHGR
NRYEGGYEDG RFI