| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2898 |
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| Symbol | |
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| ID | 9246749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 3461219 |
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| End bp | 3464503 |
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| Gene Length | 3285 bp |
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| Protein Length | 1094 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003680815 |
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| Protein GI | 297561841 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.343101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTTCT CCATCCTCGG GCCCCTGGCG GTCCACGACG CGACCGGGCG ACCCGTCGCC
ATCGGCGGTG CGCGCCTGCG CACGCTGCTC ACCCTCCTCC TGCTCCGGCC CGGCCAGCGG
ATCGCCAACG ACGAGCTCAC CGACGCCGTC TGGGCGGGGA GCCCGCCCGC TGCGGCGGGC
AATGCCCTCC AGGCCCTGGT CTCCCGCCTG CGCCGCGCGC TGGGCGAGGG CGCGCGCATC
GACGGGGACG CGTCGGGGTA CCGGTTGGCG GTCGAGCCCG GCCAGGTGGA CCTGGCCGAG
TTCGAGTCCC TGGTCAGGCG GGGGCGGGCC GGGCTCGTCG CGGGCAGGGC CGCCGACGCC
GCCCGCGACC TGGGCGAGGC CCTCGCCCTG TGGCGCGGAC CGGCCCTGTC GGACCTGACC
GCGCACGGTC TGGCCGAGGA CACGGCGCTG CGCCTGGCCG AGACCCGCCG AGCGGCCCTG
GAGGACCGCC TGACCGCCCT GGCCGACCTC GGGCTGTACG CCGAGGTCCT GCCCGAGGCG
GAGGCCCTGT GCCGAAGCGA GCCGCACCGC GAGGGCCCCC TCGCGCTCCT CGTGCGCGCG
CTGGCCGCCA CCGGCCGCAC GGCCGACGCC CTGGCCGCCT ACGAGCGCTT CCGCTCCCAC
CTGGCCGACG AGCTGGGCCT GGACCCCTCG CCCCAGCTGC GCGACCTGCA CCTGAGGCTG
CTGCGCGGCG AACTCGACGC GTCCCCTGCC GCCGCGCCCT CCGCCCCGCC CCCGGCTCCG
GCCCCGCCCC TGCGCCTGCC CGCCTCCCTG ACCAGCTTCG TGCCGCGCGA CACCGAGGTG
GACACCGCCG TCGACCTGCT CATCCGCGAA CGCCTGGTCA CCCTGCTGGG CCCCGGCGGC
GCGGGCAAGA CCCGCCTGGC GATCGAGAGC GCCTCCGCGC TGGCCGCGCG GGCTCCCTCC
CTGCTCTCCC GCGGCGGCTG GTTCGTCGAA CTCGCCTCCA GGGCGGCCGC GGACGTCCCC
CAGGCACTGG CCTCCGCGCT GGAGCTGCGC GAGCACGCCG TGCTCCAGGC GCGCTCCGCG
GCCCCCAACG CCCCCGCCGC CCTCGTTCCG CTCCTGGAAC GGGTGGTCTC CTTCGTCGGC
GACCGCCACG TCCTCCTCGT CCTGGACAAC TGCGAGCACA TCGTCGAGGA GGTCGCCTCC
GCCGTGGCGA CGCTGCTGGC CCGCTGCCCC GGCCTGCGGA TCCTGGCCAC CTCCCGCGAA
CCCCTGGGGG TGCCCGGCGA ACAGCTCCTG ACCGTCCCCT CCCTGGACAT GCCGCCCGAG
GGGGCCTCCG CCGACCGGGC CGCCGCCTGC TCCTCGGTCG TCCTGTTCGC CGAACGCGCC
GCCGCCGTGC GTCCGGGCTT TCGCGTCACC CCCGACAACG CCGCCCACGT CGTCCGCGTC
GTCCGCGAGC TGGACGGCCT GCCGCTGGCC CTGGAGCTGG CCGCCGCGCG CCTGCGCTCC
ATGAGCACCG CCCAGCTCGC CGACCGGCTC CGCGACCGCT TCCGGCTCCT CACCGGGGGC
GCCCGGTCGA CGCTGCCGCG CCACCGCACC CTGCGCGCCG TCGTCGACTG GAGCTGGGAC
CTGCTCGACG AACCCGAGCG CCGCCTGCTG CGCCGCCTGT CGATCTTCGC CGGGGGAGCC
ACCCTGGAGG CCGTCGAACG GGTCTGCGCC GACCCCGGCA CCGAGGGGGA GATCGGCGGC
CACGACGCGT GGACCGTCCT GTTCGCCCTG GTCGACAAGT CCCTGGTGAT CGCCGAGAAC
CCCGACCGTG ACGACACCCC GCCCCGCTAC CGGCAGCTGG AGACCGTGCG TGCCTACGCC
GCCGAACGCC TGGCGAGCAG CGGGGAGGAG GAGCGCGTGC GCGACGCGCA CGCCCGCCAC
GTCCGCGACC TGTGGCGCTG GGCCGACCCG CTGCTGCGCG GCCCGCGCCA GGGGGAGCTG
CTCGCCCGGC TGGCCGCGGA GGCCGACAAC TGCGGCGCCG CCGTGCGCTG GGCCGTCGAG
CGGCGCGACG CCGGACTGGC CCTGGACCTG GTCGAGTGCA CCCAGTGGTA CTGGACCCTG
TGCGGCTCCT GGCGCCAGCT CCACCAGTGG GCCGTGGACG TCCTGGACAT GGTCGGCGAC
CGGGTGCCCG AGGGGCGCGC CGTGGCCTAC GCCAGCTGCC TGTTCCAGCG GGCCGACACG
ACCACCGACC ACGAGTCGGT GCTGGAGCGC ATACGCGAGG TCGAGGCCGT CCTGGAAGAG
GCCGGACAGC GGGCCGAGGA GCACCCCATG CTCGTCTACG GCCTGGTGTA CAGGGCGCTG
CTGGAGGGGA CGACCGGCGC CGCCCACGAA CGCCTCGCCG CCGCGGCCGA CCAGGCCGAC
CCGTGGATGC GGGCCCTCGT GGGGGTGCTG CTGTCGCTGT TCGACGCGGT CAACGGGCGC
ACCGGGCGGT CCATGGAGCG CGCGAACGCC GCCCTGGAGC AGTTCCGCGC GTGCGGCGAC
ACCTGGGGCG AGTGCCAGGC GCTCGTCCAG GCCGTGGACC TGTACCGGTT CGAGGACCTC
GACCGCTGCC GCGACCTGCT CACCCTCGGC GTGCGCAGGA CCGAGGAGGC GGGGCTGGAG
GCGCTGGACT GGATGTTCCG CGTCCGCCGG GCCCAGGTCC TCACCGACCT CGGCGACCTG
GAGGCCGCGC GTGAGGACCT GCGGGGGCTC CTCGGCTCCG AGCGGCCCGT GGAGAAGGAA
CAGATGGTGC TGCTGCGCCT GGCCGAGGGC CAGTGGCTGC GGGAGGCGGG GGAGCCGGAC
GCGGCCCGCG AGGTCCTGGA CCGGGCGGGC GAGGACCTCA AGGGCCTGGG CGGGTTCTCG
CCCGTCTACG TGGAGGCGGG CTGGCGGACC CTGTACACGA CCGTCGCCTG GAGGGCCGGT
GACACCGGGG AGGCCTGGGA GCACGCCCGG CGCGCCTGGC GGCTGGCCGA CCACGGCCTG
GGCCCGGTGT GCGCGGAGGT CCTGGACACC TTCGCCGTGA TGGCCGTCGG ACACGACCCG
AGGCGCGGCG CCTGGCTGCT GGCCTGCGCC GAGGTGCTGC GCGGCATGCC CGACACCGCC
ACGCCCCTCG TGGTGCGGGC CCGCGAGAGC GCGCGCCGGG AGCTGGGCGG ACGGGAGTAC
GACCTCGTCC TCGCCGGGGT CCGGGATGTG GGCGCCGACC GGATCCGCGG GCTCGTGGAC
GCCTGGCTGG CCGAGGGCGC GCCCGGTGGC GCGGAGCGCC CCTGA
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| Protein sequence | MRFSILGPLA VHDATGRPVA IGGARLRTLL TLLLLRPGQR IANDELTDAV WAGSPPAAAG
NALQALVSRL RRALGEGARI DGDASGYRLA VEPGQVDLAE FESLVRRGRA GLVAGRAADA
ARDLGEALAL WRGPALSDLT AHGLAEDTAL RLAETRRAAL EDRLTALADL GLYAEVLPEA
EALCRSEPHR EGPLALLVRA LAATGRTADA LAAYERFRSH LADELGLDPS PQLRDLHLRL
LRGELDASPA AAPSAPPPAP APPLRLPASL TSFVPRDTEV DTAVDLLIRE RLVTLLGPGG
AGKTRLAIES ASALAARAPS LLSRGGWFVE LASRAAADVP QALASALELR EHAVLQARSA
APNAPAALVP LLERVVSFVG DRHVLLVLDN CEHIVEEVAS AVATLLARCP GLRILATSRE
PLGVPGEQLL TVPSLDMPPE GASADRAAAC SSVVLFAERA AAVRPGFRVT PDNAAHVVRV
VRELDGLPLA LELAAARLRS MSTAQLADRL RDRFRLLTGG ARSTLPRHRT LRAVVDWSWD
LLDEPERRLL RRLSIFAGGA TLEAVERVCA DPGTEGEIGG HDAWTVLFAL VDKSLVIAEN
PDRDDTPPRY RQLETVRAYA AERLASSGEE ERVRDAHARH VRDLWRWADP LLRGPRQGEL
LARLAAEADN CGAAVRWAVE RRDAGLALDL VECTQWYWTL CGSWRQLHQW AVDVLDMVGD
RVPEGRAVAY ASCLFQRADT TTDHESVLER IREVEAVLEE AGQRAEEHPM LVYGLVYRAL
LEGTTGAAHE RLAAAADQAD PWMRALVGVL LSLFDAVNGR TGRSMERANA ALEQFRACGD
TWGECQALVQ AVDLYRFEDL DRCRDLLTLG VRRTEEAGLE ALDWMFRVRR AQVLTDLGDL
EAAREDLRGL LGSERPVEKE QMVLLRLAEG QWLREAGEPD AAREVLDRAG EDLKGLGGFS
PVYVEAGWRT LYTTVAWRAG DTGEAWEHAR RAWRLADHGL GPVCAEVLDT FAVMAVGHDP
RRGAWLLACA EVLRGMPDTA TPLVVRARES ARRELGGREY DLVLAGVRDV GADRIRGLVD
AWLAEGAPGG AERP
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