Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2884 |
Symbol | |
ID | 9246735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3443334 |
End bp | 3444584 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003680801 |
Protein GI | 297561827 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.616197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGACCGG CGGAGCGGAC CGAACCGGGA CAGGTCGAGC CCACCCGCCC CGGCGACACC GGTACGTGGC GGCGCCTCAA CACCCTCACC CCCGAGGGCT CGGGGACCGA GCGCTCCGCG GCCGCCGCCC GGGTACACCA CTTCACCGAC AACCTCAGTC TGCGCGCGCG GCTCACCCTC ATCTACGGGA TGCTGTTCTT CGCCGCGGGC TCGGTGCTGG TCCTGGTCAA CTACCTGATC GTCGCGGTCC TGCTCAACGC GCTCCTGGTC GAGCAGAGCT TCGCCGAGCT GCGGGCGCAC AGGGACCTCA TCGAGCAGGT GCTCACCCAC GTCACCCGGT TCTCGCTGCT CGCGCTGTTC CTGGTGGGCC TGCTCGCGGT CGCCCTGGGC TACGCGGTGG CCGGAAGGGC GCTGTCCCCG CTCCAGAAGA TCACCCGCAT CGCCCGCCGC CTGTCGGAGC GCTCCCTGCA CGAGCGCATC GCCCTGTCCG GGCCCGACGA CGAGATCCGC GAGCTCGCCG ACACCTTCGA CGGCATGCTG GAGCGCCTGG ACCGCGCCTT CGACGGCCAG CGCCGCTTCG TCGCCAACGC CTCGCACGAG CTGCGCACGC CGCTGGCGAT CAACCGCACC CTGCTGGAGG TGGCGCTCAG CGCCCCCGAC GTCTCGGCCG ACCTCAAGAG CGTCGGACAG ACCCTGCTGG AGACCAACGC CCGCCACGAA CGCCTCATCG AGGGGCTGCT CCTGCTCGCC AAGAGCGACC GCGAGCTGGA GGTCCGCGCC AAGGTCGACC TGGGCGAGGT GGCCGGGACG GTGCTCAGCC AGCTCAGCGG ACCGGTGGCC GACTCCGGCC TGAGCCTGCG CCAGGACCTG CGCCCCGCGA CTGTGGTCGG CGACCCCGTT CTGCTGGAGC GGCTCGTGGG CAACCTGGTG GAGAACGCCC TCAAGTACAA CGTCGAGGCG GGCGAGATCA CCGTGCGCAG CGGCATGTAC GAGGGCACGC CCGCCGTCCA GGTGGAGAAC TCCGGCAAGG TCATCCCCGC CTACGAGATC GAGGGCCTGT TCGAGCCGTT CCGCCGCGGC TCCGGCGACC GGGTGGGCTC GGGCCGCAGC GCGGGGCTGG GCCTGTCCAT CGTCCGGTCC GTGGTGCGCG CGCACGAGGG CGCGGTGACC GCGTGGCCGC GCGCCGGGGG AGGACTGGTC GTCACCGTGC GCCTTCCCCT TCCTCCGGGA GAGGGCGCGG AGCGGCGCTG A
|
Protein sequence | MRPAERTEPG QVEPTRPGDT GTWRRLNTLT PEGSGTERSA AAARVHHFTD NLSLRARLTL IYGMLFFAAG SVLVLVNYLI VAVLLNALLV EQSFAELRAH RDLIEQVLTH VTRFSLLALF LVGLLAVALG YAVAGRALSP LQKITRIARR LSERSLHERI ALSGPDDEIR ELADTFDGML ERLDRAFDGQ RRFVANASHE LRTPLAINRT LLEVALSAPD VSADLKSVGQ TLLETNARHE RLIEGLLLLA KSDRELEVRA KVDLGEVAGT VLSQLSGPVA DSGLSLRQDL RPATVVGDPV LLERLVGNLV ENALKYNVEA GEITVRSGMY EGTPAVQVEN SGKVIPAYEI EGLFEPFRRG SGDRVGSGRS AGLGLSIVRS VVRAHEGAVT AWPRAGGGLV VTVRLPLPPG EGAERR
|
| |