Gene Ndas_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2854 
Symbol 
ID9246705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3407278 
End bp3408489 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content70% 
IMG OID 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003680771 
Protein GI297561797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.232539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGCT TTGACTGCGG TCTGTCACTG GCCGGGTGCA CGATGGCGGG CGTGTCGAAG 
ATCGTCGTGC AGCTCGGGCT CACGCCGTCG CCCGAGCAGG CGGCGGTGCT GGCTTCGACC
CTGCGCGCGC TCAACACCCA CGCCACCCGG GTGGCGAAGG TGGCCCACGA GCAGGGCGTG
ATGCGCGACT ACGAGCTGCG CAAGCACACC TACCGGCAGC TGCGTGCGGC CGAGGTGGGC
TCACAGGCGG CCCGACACGT GATCAAGAAG GTGTGCGACG CCTACCGCAC CCGCCGCGCC
AATCTGGACA ACGGCGACTA CGGGCCGAAG GGATCAGTCC GCCGCACGCG GATCGGGTCC
ACACCCATTG CCTTCCGCGC GGGCTCGGCG CACCCCTACG ACGCGCGCGA CCTGTCGTTC
GCGATGGACG CGCGCACGAT CTCGCTGTGG ACCTTCCAGG GCCGGTTGCA GGACGTGCCG
TTCACCGGTT CTGCCGACCA GGTCAAGGCG CTGGCCGGGC ACAAGCGCGG TGAGGCCGAC
CTGCTCCGCC GCGACGGCGC CTGGTTCCTC GCGGTGACCG TGGAGGTGCC CGACGCCCCC
GAGCAGGAGC CGGACGGGTT CGTGGGGGTG GACCTGAGGA TCATCAACAT CGCCACCACC
AGCGACGGCC AGGTCATGGC CGGGCGCAGG ATCAACCGGT ACCGCCGCCG CCGGCTCAGG
CTGCGCCAGA AGTTGCAGGC CAAGGGCACC CGCTCCGCCA AGCGCCTGCT CAGGAAGCGC
CGCCGCAAAG AAGCACGGCA TGCCGACACC AACCACCAGA TCTCCAAACG CATCGTGGCC
GAGGCCGAAC GCACCGGGCG CGGCATTTCC CTCGAAAACC TGACGGGGAT TCGCGCGCGG
GTACGGCAAC GCAGGCCCCA ACGGGCCACG CTGCACTCCT GGTCCTTCCA CCAGCTGGGC
GCCTTCATCG CCTACAAGGC CCGCCTGAAA GGTGTGCCGG TGGTCTTCGT GGACCCGGCG
CACTCCTCAC GCGAGTGCGC CGCATGCTCC TACACTCACA GGGCCAACCG GGTCTCACAG
GCCTTGTTCA TCTGCCGGTC GTGCGGCGTC GTTGCGCACG CGGACCGCAA TGCTTCCCGT
GTCCTGGCCC GCAGGTGCCA GGAGGCGTGG AACGCGGGGC GGAAGTCACA CGTCCCACCC
GGCCACCCCT AA
 
Protein sequence
MDCFDCGLSL AGCTMAGVSK IVVQLGLTPS PEQAAVLAST LRALNTHATR VAKVAHEQGV 
MRDYELRKHT YRQLRAAEVG SQAARHVIKK VCDAYRTRRA NLDNGDYGPK GSVRRTRIGS
TPIAFRAGSA HPYDARDLSF AMDARTISLW TFQGRLQDVP FTGSADQVKA LAGHKRGEAD
LLRRDGAWFL AVTVEVPDAP EQEPDGFVGV DLRIINIATT SDGQVMAGRR INRYRRRRLR
LRQKLQAKGT RSAKRLLRKR RRKEARHADT NHQISKRIVA EAERTGRGIS LENLTGIRAR
VRQRRPQRAT LHSWSFHQLG AFIAYKARLK GVPVVFVDPA HSSRECAACS YTHRANRVSQ
ALFICRSCGV VAHADRNASR VLARRCQEAW NAGRKSHVPP GHP