Gene Ndas_2844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2844 
Symbol 
ID9246695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3392883 
End bp3395099 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content72% 
IMG OID 
ProductMMPL domain protein 
Protein accessionYP_003680761 
Protein GI297561787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACAC AAACGGGGCT TTTCGGTCGG CTGGGACGGG GAGTCCACCG CTGGCGCTGG 
GCGGTCCTCG CCGCCACCGC GGTCTTCGCC GTCTTCTCCG GGATCTGGGG CTCGGGGCTC
TTCTCCGACG TCAGCGAGAG CGGGTTCGAG GATCCCGACT CCGAGTCCGC GCGGGCCACG
CGCGTCCTGG AGGAGGAGCT GGGCCACGAC GGCGTCGACG TCGTCGCGGT CTACCGCAGC
GACGAGATCC GGGTGGACAA CCCCACCTTC GCCGCGGCGG TCCAGCGTAT CGCCGACGGC
ATGCCCGAGG ACGCGGTCGC CGACTTCGAC ACCTACCTCG ACGAGGACCT CGGCGAGACC
GAGCGCGGCA TGCTCGTGGC CGAGGACATG GACGCCACCT ACATCCCCGT GACTCTCAGC
GGGGAGACCC ACGCCGATCG CCTCCACCAG TACGAGGAGG TGGCCGAGTA CCTGTCCTCC
AGCAACTTGG AGGTCCACCT GGGCGGCTCG GTGGCGATCG AGCACGAGCT GGCCGAGAGC
GCCGAGAGCG ACGTCGTCCG CGCCGAGCTC ATCACCCTGC CGATCCTGCT GTTCCTGCTC
GTCCTGATCT TCGGCGGCCT CGTCGCGGGC CTGGTCCCGC TCGCCGTCGG CGGCCTGGCC
ATCCTGGGCT CGCTGACCCT CCTGCGCGCG CTGACCCACG TCACCGAGGT GTCGGTGTTC
GCGATCAACG TCGCCACCAT CCTGGGCCTG GGGCTGGCGA TCGACTACGG ACTGTTCATG
GTCAGCCGCT TCCGGGAGGA GTTGCGCCGG GGCCGCAGCA TCGCCGACGC GGTGAGCCGT
ACGGTGGACA CCGCCGGACG CACCGTGGCC TTCTCCGGCA TCACCGTCGG CATCGCCTTC
GCTGGCCTGC TCTTCTTCCC CCAGCCCATC CTCAAGTCGA TCGGCTGGGG CGGCATCGCC
GTCGTGGTCT TCGACCTGCT GGCCGCGCTG GTCTTCCTGC CCGCGCTGAT GGCCGCGGTC
GGGCACCGCG TCAACCGCCT GAGGCTGCCG CTGCCCCGCC GCACCGTCAC CGGAGCCGTG
CACGAGGGGG CCTGGTCGCG CCTGGCCCGC GTCGTCATGC GCGGCCCCGC CGTGTCCCTG
GTCGCGGTCG GCGGCGTCCT GCTGGTCTTC AGCGCCGGCC TGGCCTCCAC CGAACTCGGC
TCCACCGACC AGCGCTACCT GCCCGCCGAC TCCGGGAGCC GGATCGCCAC CGAGGCGCTC
TCCGACGACT TCCCCGCGGG CGGCCTGGGC ACGCTCGACG TCGCGGTGGT CGGCGGCGCC
GACGACGGGG CCCTGGAGGA GTACACCGAG CGCCTGGCGG GCCTGGAGGA GGCCGTGTCG
GCGACGGTGG AGCGCACCGG CGAGGACGTC GCCCACGTCG TGGTCGCCTA CCGGGGCGCC
TCCGACTCCC CGGAGGTCGC CGACCTGGTG CGCGACGTGC GCGCCGAACC GGTTCCGGAG
GGGGCGGAGG AGAGCCTGGT CGGCGGCGTG GCCGCCATGC AGCAGGACAA CGTGGCGGCG
ATCGTCGACG CGGCGCCCAT GACCGTGGGC TTCGTCGCCA CGGCCACCCT GCTCCTGCTC
TTCCTCGCCT TCGGTTCGAT CGTCCTGCCG GTCAAGGCGG TGCTCATGGG GGCGCTGTCC
CTGGGCGCCT CCCTGGGCGT GGTGGTCTGG GGCTTCCAGG AGGGCGCCTT CTCCGGGCTG
CTCGGGTTCG AGGCGGTGGG CACCATCGAC CCCACCTACC TGGTGCTGAT CATCGTCGTG
GCCTTCGGCC TGGCGATGGA CTACGAGCTG TTCCTGCTCA GCCGGGTGCG CGAGGAGTAC
CTGCGCACCG GGGACAACAC GCGCTCGGTG GCGGCGGGGC TCCAGCACAC CGGCCAGATC
ATCACCAGCG CCGCGATCCT GCTGATGGTG GTGCTCCTGG CCATGGGCAC CTCGGACCTG
CTCTTCCTGA AGGTCATCGG CATCGGCCTG GCCATCGCGG TCCTGGTGGA CGCCACCCTG
GTGCGCGCGG TCATGGTGCC CGCCACGATG CGCCTGCTGG GCGGGGCCAA CTGGTGGCTG
CCCCGGCCGC TGCGCTGGCT GCACGACCGG ATCGGGATCT CCGAGGGCGG CGACGAGGAC
GGGCCCGAAC CCGCCGTGGA GCGGGACGGG CGCAGAAGGG TGCACGCGGG GGTGTGA
 
Protein sequence
MPTQTGLFGR LGRGVHRWRW AVLAATAVFA VFSGIWGSGL FSDVSESGFE DPDSESARAT 
RVLEEELGHD GVDVVAVYRS DEIRVDNPTF AAAVQRIADG MPEDAVADFD TYLDEDLGET
ERGMLVAEDM DATYIPVTLS GETHADRLHQ YEEVAEYLSS SNLEVHLGGS VAIEHELAES
AESDVVRAEL ITLPILLFLL VLIFGGLVAG LVPLAVGGLA ILGSLTLLRA LTHVTEVSVF
AINVATILGL GLAIDYGLFM VSRFREELRR GRSIADAVSR TVDTAGRTVA FSGITVGIAF
AGLLFFPQPI LKSIGWGGIA VVVFDLLAAL VFLPALMAAV GHRVNRLRLP LPRRTVTGAV
HEGAWSRLAR VVMRGPAVSL VAVGGVLLVF SAGLASTELG STDQRYLPAD SGSRIATEAL
SDDFPAGGLG TLDVAVVGGA DDGALEEYTE RLAGLEEAVS ATVERTGEDV AHVVVAYRGA
SDSPEVADLV RDVRAEPVPE GAEESLVGGV AAMQQDNVAA IVDAAPMTVG FVATATLLLL
FLAFGSIVLP VKAVLMGALS LGASLGVVVW GFQEGAFSGL LGFEAVGTID PTYLVLIIVV
AFGLAMDYEL FLLSRVREEY LRTGDNTRSV AAGLQHTGQI ITSAAILLMV VLLAMGTSDL
LFLKVIGIGL AIAVLVDATL VRAVMVPATM RLLGGANWWL PRPLRWLHDR IGISEGGDED
GPEPAVERDG RRRVHAGV