| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2814 |
|---|
| Symbol | |
|---|
| ID | 9246665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3360573 |
|---|
| End bp | 3362270 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | nitrite and sulphite reductase 4Fe-4S region |
|---|
| Protein accession | YP_003680732 |
|---|
| Protein GI | 297561758 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCCT CTTCCGCGCA GCCCGGCAGG ACAGCGACCG CGGCCAAGCC GCGCCGCCGC
CGTGGTGAGG GCCAGTGGGC CCTCGGCTAC CACGAGCCGC TGAACAAGAA CGAGGAGAAC
AAGAAGAACG ACGACGGGCT CAACGTCCGC GATCGGATCA TCAACATCTA CTCCAAGGGC
GGGTTCGACT CGATCGACCC CGCCGACCTG CGCGGACGGT TCCGCTGGTT CGGCCTGTAC
ACCCAGCGCG CGCCGGGTAT CGACGGCGGC AAGACGGCCG TCCTGGAGCC CGAGGAACTC
GACGACCGCT ACTTCATGCT GCGGGTGCGC ATCGACGGGG GGCAGCTGAC GGTCGCCCAG
CTGCGCGCGG TCGCCGAGAT CTCCCGCGAC TACGGGCGCG ACACCGCCGA CATCACCGAC
CGCCAGAACG TCCAGTACCA CTGGATCCGG GTGGAGGACG TCCCGGCGAT CTGGGAGAAG
CTGGAGTCGG TGGGCCTGTC CACCATGGAG GCCTGCGGCG ACACCCCGCG CGTCATCCTG
GGCTGTCCGC TGGCCGGGGT CGCCGAGGAG GAGGTCATCG ACGCCGGTCC CGCGATCCGC
GAGATCTACG AGGACCACAT CGGCAGCGAG CTGTACTCCA ACCTGCCTCG CAAGTTCAAG
ACCTCGGTGT CGGGGTGCAC GGTGCACTGC GTCAACCACG AGATCAACGA CGTGGCGTTC
GCGGGCGTGC GCAACGAGGC GGGCGAGGCG GGCTACGACC TGTTCGTCGG CGGCGGCCTG
TCCACGAACC CGATGTTCGC CCAGCGCCTG GGCACGTTCG TGCGCCCGGA CCAGGTGAGC
GAGGTGTGGG CCGGGGTCTG CGGGATCTTC CGCGACTACG GCTACCGGCG CCTGCGCACC
CGCGCCCGGA TCAAGTTCCT CATCAAGGAC TGGGGCGCGG AGAAGTTCCG CGACGTCCTG
GAGAAGGAGT ACCTGGGCTA CGCCCTGCCC GACGGCCCCG CCGTCGAACT GGACTCGGGC
CTGCGCCGCG ACCACGTGGG CGTGCACCGC CAGAAGGACG GCAGGTTCTA CGTGGGCTTC
GCGCCCAAGG TGGGCCGGGT TTCGGGCACC GCGCTGCTGC GCGTCGCCGA CATCGCCGAG
GAGCACGGTT CGGACCGCGT CCGCACCACC GCCGACCAGA AGCTGGTCAT CCTCGACGTG
GAGGAGGACC GGATCGCCTC GATCACCTCC GCCCTGGAGA CGGAGGGGCT CCAGGTCAAC
CCGAGCGTGT TCCGCCGCCA GACGATGGCC TGCACCGGCA TCGAGTTCTG CAAGCTGGCG
ATCGTGGAGA CCAAGGACCG CGCGGCCACC CTGATCGACG AGCTGGAGAA GCGGCTGCCC
GACTTCGAGG AGCCGCTGAC CATCAACGTC AACGGCTGCC CGAACTCGTG CGCGCGCATC
CAGGTCGCCG ACATCGGCCT CAAGGGCCAG CTCGTCATGA ACTCCGAGGG CGAGCAGGTC
GAGGGCTACC AGATCCACCT GGGCGGCGGC ATGGGGCTGA CCCAGTCCTT CGGCAAGAAG
ATCCGCGGAC TCAAGGCCAC CGCCGACGAG CTGCCCGACT ACGTCGAGCG GGTGGTGCGC
CGGTTCCAGG ACCAGAAGGA GGACGGCGAG TCGTTCGCCT CCTGGGTCGG CCGGGCCGAG
GACGCCGACC TGAAGTAG
|
|---|
| Protein sequence | MPPSSAQPGR TATAAKPRRR RGEGQWALGY HEPLNKNEEN KKNDDGLNVR DRIINIYSKG
GFDSIDPADL RGRFRWFGLY TQRAPGIDGG KTAVLEPEEL DDRYFMLRVR IDGGQLTVAQ
LRAVAEISRD YGRDTADITD RQNVQYHWIR VEDVPAIWEK LESVGLSTME ACGDTPRVIL
GCPLAGVAEE EVIDAGPAIR EIYEDHIGSE LYSNLPRKFK TSVSGCTVHC VNHEINDVAF
AGVRNEAGEA GYDLFVGGGL STNPMFAQRL GTFVRPDQVS EVWAGVCGIF RDYGYRRLRT
RARIKFLIKD WGAEKFRDVL EKEYLGYALP DGPAVELDSG LRRDHVGVHR QKDGRFYVGF
APKVGRVSGT ALLRVADIAE EHGSDRVRTT ADQKLVILDV EEDRIASITS ALETEGLQVN
PSVFRRQTMA CTGIEFCKLA IVETKDRAAT LIDELEKRLP DFEEPLTINV NGCPNSCARI
QVADIGLKGQ LVMNSEGEQV EGYQIHLGGG MGLTQSFGKK IRGLKATADE LPDYVERVVR
RFQDQKEDGE SFASWVGRAE DADLK
|
|---|
| |