Gene Ndas_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2796 
Symbol 
ID9246647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3338046 
End bp3339152 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content73% 
IMG OID 
Productpermease 
Protein accessionYP_003680714 
Protein GI297561740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.250331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.1662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACC GGACGACGCC CGCCGCCGCA CCCGACCCCG CCGCGCCCGG CTCCGCCCCG 
CCCAACGCCT CCGCCTCGCT CGGCGACACC CTCGCCGGGG GGTGGAACGA CCGCGGCGAC 
GAACTGCCCC CCGAGGACTG GGGGCGCAGG GGCGGCCAGC GCAGGACCGG CACGGTCTGG 
CTGTTCGCCC TGTTCATCAC CGCCATGGCG ATGGGGCACG CCTGGGTCAC CGACCGGCTG 
ACCAGCGACG CCTTCCTGGC CTGGGCCACC ATCTTCACCG CGATCAGCTT CCAGGCGCTG 
CCCTTCCTGG TCTTCGGCGT CGCGCTGTCG GCGGCGCTCA CCGCGTTCGT CCCGACCTCG 
GTCTACCAGC GCCTCATCCC CTCCAGCCCC GCGCGGGCGG TGCCGGTGGC CGGGGCCTCC 
GGCGCCCTGC TGCCCGGGTG CGAGTGCGCC TCGGTCCCCA TCGCCGGAAG CCTGATCAAG 
GGCGGGGTCG CGCCCGCCGC CGCGCTGACC TTCCTGCTGG CCGCGCCCGC GATCAACCCG 
ATCGTGATGA TCGCCACCGC GGTGGCCTTC GCCGGGCAGC CCGAGATGGT GCTCGCCCGG 
TTCGTCGCCT CGCTGCTGGC CGCCGTGGTC ATCGGATGGA TCTGGGTGCG CTTCGGCCGC 
ACCGACTGGC TGCGCCTGCC CGCGCGCACG CACGCCCCCG GCGAATCCCG GTGGACCGTC 
TTCCGCGAGT CCATGCTGCA CGACATGATG CACGCGGGCG GCTACCTCGT GGTCGGCGGC 
CTGGCCGCGG CCTCCCTCAA CGTCCTGGTC CCGCGCGAGT GGCTGGTGAC GGTGGCCGGG 
CTCCCGGTCG TCTCGGTCCT CGTGCTCGCC CTGCTCGCCA TCCTGCTGTC CATCTGCTCC 
GAGGCCGACG CGTTCGTCGC GGTCAGCCTC ACCGAGTTCT CGCCCACCGC CAAGCTCGCG 
TTCATGGTGA TCGGCCCGAT GGTCGACCTC AAGCTCATCG CGATGCAGGC GGGTGTGTTC 
GGCTGGCGCT TCGTGGTGCG CTTCGCGCCG ATGTGCCTGC TGGTCGGGCT GCTCAGCACC 
TTCCTGATCG GAGGCCTCTT CCTGTGA
 
Protein sequence
MSDRTTPAAA PDPAAPGSAP PNASASLGDT LAGGWNDRGD ELPPEDWGRR GGQRRTGTVW 
LFALFITAMA MGHAWVTDRL TSDAFLAWAT IFTAISFQAL PFLVFGVALS AALTAFVPTS 
VYQRLIPSSP ARAVPVAGAS GALLPGCECA SVPIAGSLIK GGVAPAAALT FLLAAPAINP 
IVMIATAVAF AGQPEMVLAR FVASLLAAVV IGWIWVRFGR TDWLRLPART HAPGESRWTV 
FRESMLHDMM HAGGYLVVGG LAAASLNVLV PREWLVTVAG LPVVSVLVLA LLAILLSICS 
EADAFVAVSL TEFSPTAKLA FMVIGPMVDL KLIAMQAGVF GWRFVVRFAP MCLLVGLLST 
FLIGGLFL