Gene Ndas_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2781 
Symbol 
ID9246632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3321711 
End bp3322985 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content72% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003680700 
Protein GI297561726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.57519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.304571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC GGGGCAGGGA CGCCGGCGCC CTGTGGAACA AGAACCGGGA GTGGTGGTGG 
GCCCGCCGCC TGACCATCGC CGACTGGCTC TACGCCGTGC TGCCGCTGCC GTTCAGCTGG
GTACTGCAAC TGGTGGGCAG CACGCAGCTC GGCCTGTTCG GCGGGCTCGT CCCCGCGCTC
CTGGCGCTCC TGGCCAACGT GAACATCGCG TTCGCCCTGG CCGCCGGGGT GGTCCTCTAC
GTGATCCCGG TCGTGTTCGC CGGTGCCACG GTCCTGCTGC GGCGGAGCTT CCCGCAGTGG
ATGCTCGTCA CCGCGCTCGT GCTGCTGCTG TGCTTCGCCA ACTTCGTCCC GGCCGTGATC
GCCCTGTACT CGTACTCGGT GTACCAGGGC AACCGTCGCC TGCTGGTGGG CTGGTTCGCC
CTGTACAGCC TGGCCATGGT CGTCGCCTAC GAGGCCAACC CCCTCGGCCA GGTCTTCCTC
ATCGGGATGC TGCTGGTCGT ACCGATGGTC TTCGGCCTGT GGGTGGGCAC CCGCCGCCAG
CTCATCGACC GCCTCCACGA GCGCGCCGAG CGCCTCGAAC GCGAACAGCA CATGATGGCC
GAGCAGGCCA TCACCGCCGA GCGCACCCGC ATCGCCCGGG AGATGCACGA CGTGGTCGCC
CACCGGGTCA GCCTCATGGT GCTGCACGCG GGAGGGCTGG AGGTCTCCGC CGAGGACCCG
CGCACCGTCG AGGCGGCCGG GCTCATCCGC ACCACCGGCC GCGAGGCCCT CACCGAACTG
CGCGGCATCC TCGGGGTGCT GCGCGACGAC ACCGACGCCG CGCCCACCGC CCCCCAGCCG
GTCCTGTCGG ACCTGGACCG CCTGGTGGGG GAGTGGCGCG CCGCCGGGAT GCCGATCGAC
CGGGAGGAGA GCGGCCGGGT CCGCCCGCTG CCGACGGGCG TCCAGCGCAC CGCCTACCGG
ATCGTCCAGG AGGGGCTGAC CAACGCCGCC AAGCACGCGC CCGGAGCCGC CGTCACCCTG
CGTCTGCACT ACGCCGACCG CCAGCTGGAG GTGGAGGTGG CCAACGCGCC CGCGCGGGGC
CCGGCCTCGC CCATGCCCCG CAGCGGTTTC GGTCTGACCG GGCTGCGCGA GCGCGTCGTG
CTCTCCGGCG GAAGCCTCAG CGCGGGGGCG TGCCCCGACG GCGGGTGGCG TCTGCGCGCT
ATCGTGCGAA CCGACGATCC ATCCGGTACG GAGGAAGAGG TTTCCGAAGG TGATCCGCAC
GCTCCTGGTC GATGA
 
Protein sequence
MSDRGRDAGA LWNKNREWWW ARRLTIADWL YAVLPLPFSW VLQLVGSTQL GLFGGLVPAL 
LALLANVNIA FALAAGVVLY VIPVVFAGAT VLLRRSFPQW MLVTALVLLL CFANFVPAVI
ALYSYSVYQG NRRLLVGWFA LYSLAMVVAY EANPLGQVFL IGMLLVVPMV FGLWVGTRRQ
LIDRLHERAE RLEREQHMMA EQAITAERTR IAREMHDVVA HRVSLMVLHA GGLEVSAEDP
RTVEAAGLIR TTGREALTEL RGILGVLRDD TDAAPTAPQP VLSDLDRLVG EWRAAGMPID
REESGRVRPL PTGVQRTAYR IVQEGLTNAA KHAPGAAVTL RLHYADRQLE VEVANAPARG
PASPMPRSGF GLTGLRERVV LSGGSLSAGA CPDGGWRLRA IVRTDDPSGT EEEVSEGDPH
APGR