Gene Ndas_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2719 
Symbol 
ID9246570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3240642 
End bp3241466 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content73% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_003680639 
Protein GI297561665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.670474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA CCCACGGGTC AGGTCCGGAC AGGCGCAGCA TCCTGCGCGC GGCCACCATC 
GCCTCAGCCA CCGCCGCCCT CGGTGCGGTC GGCGCCACAA GCGCCTTCGC CCGACCGGCC
GACACGAGCG CCGCCGTCCA GGCGGCCCAG CCCTACCTGT ACTGGCGGGG CGCCTGGGGC
GCACGCCCGC CGAGCAGCCC CATCCAGGTC CTGGCCGCCG CGCCCCGCTA CATCGTGGTC
CACCACACCG CGACGCCCAA CAGCACCAAC TACTCCCTCG ACCACGCCCT GAACCTGTCC
AGGTCGATCC AGAACCACCA CATGGACACC AACGGGTGGA GCGACACCGG TCAGCAGCTC
ACCATCAGCC GCGGCGGCTA CGTCATGGAG GGCCGCGACC GCACCCCGGA GGCCATCGCG
GCGGGCAACC ACGTCGTGGG CGCCCACGTG GCCAACCACA ACAACACCTG CATCGGCATC
GAGAACGAGG GCCTGTACAC GAGCGCGGGC CCGACCGCGG CCCTGACCGA CGCGCTGGTG
CAGACCCTGG CGTGGCTGTG CGGCGCCTAC GGGCTCAACC CCCACGGCGC CATCCTGGGC
CACCGCGACT TCAACGCCAC CGCCTGCCCC GGCGACGTGC TGTACTCCAG GCTCCCCGAG
CTGCGCGACA GGGCCGCCCA GACGATGCGG GCCCGGGGCA TCGCCATCGC CGCCCGCCAG
GAGCCGGGCG AGGACGGCCC CACCTACCCG CCCGTGCCCG ACGACGAGCC GGACCGCCTG
TTCTACCACG GTCCCGCCCG GGGCCCGGAC GACTTCTCCC GCTAG
 
Protein sequence
MTNTHGSGPD RRSILRAATI ASATAALGAV GATSAFARPA DTSAAVQAAQ PYLYWRGAWG 
ARPPSSPIQV LAAAPRYIVV HHTATPNSTN YSLDHALNLS RSIQNHHMDT NGWSDTGQQL
TISRGGYVME GRDRTPEAIA AGNHVVGAHV ANHNNTCIGI ENEGLYTSAG PTAALTDALV
QTLAWLCGAY GLNPHGAILG HRDFNATACP GDVLYSRLPE LRDRAAQTMR ARGIAIAARQ
EPGEDGPTYP PVPDDEPDRL FYHGPARGPD DFSR