| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2702 |
|---|
| Symbol | |
|---|
| ID | 9246553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 3222954 |
|---|
| End bp | 3223808 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003680623 |
|---|
| Protein GI | 297561649 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.590252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGTT CCCGACCCCC CGCGGTCAGA CGCGATCTCG GCGCCTTCCT GCGCACCCGA
CGCGAACGGC TCACCCCGGA CCAGGTGGGG CTTCCCAGCA CCGGACGCCG TCGCACGCCC
GGCCTGCGCC GCGAAGAGGT CGCGGTGCTC GCCGGAGTCG GCGTCACCTG GTACACCTGG
CTCGAACAGG GCCGACCGAT CAACGTCAGC GCGCAGGTCC TGACCGCGGT CGGCAGAGCC
CTTCGCCTGG ACGACACCGA GAAGCGACAC CTGGAACGCC TCGCCGGTGC GCGTACCCGG
TCGACCGCTC CGTTGGCACT CGACGCGTCG CTGTCGACGG CCTACCAGCC GGTACTGGAC
AAACTCGACC CCTACCCCGC CTGCCTGCAG ACCAGCGCGT TCGACGTGGT GGCCTACAAC
CTCCCCTACC GCTTCCTGTT CACGGACATG GACCGGATAC CGCCCGCTGA GCGGAACTGC
GCGTTGCAGT TCTTCACCAA CGCCGACTGG CGCAGCCGCT ATGTCGACGA CGACGTCGTC
GCCGCTCGGA TGGTCGCACA GCTGCGCGCG GTCGCCGGCA CCGACACAGG CCACACCGCG
AGCACCACGG TCCGGGAGCT GCGGCAGCGG TCGGAGGAGT TCTCGCGGCT GTGGGACCGG
CACGACGTCA TGCTCCAACA CCTGGAGACC AAACGACTGG ACAGTCCACG GGTCGGCTTG
CTGCGCCTGA ACTTCGTCTC GTCCAACGTC GCGGAGACCG GTCACCGCCT GACCGTGATG
ACACCAGCCG ACGAGACCAC CTCGCAGCGG CTCCTCCGGC TGTCAGAAGT GGACGTCGAC
GCCCAGCGCG GATGA
|
|---|
| Protein sequence | MTGSRPPAVR RDLGAFLRTR RERLTPDQVG LPSTGRRRTP GLRREEVAVL AGVGVTWYTW
LEQGRPINVS AQVLTAVGRA LRLDDTEKRH LERLAGARTR STAPLALDAS LSTAYQPVLD
KLDPYPACLQ TSAFDVVAYN LPYRFLFTDM DRIPPAERNC ALQFFTNADW RSRYVDDDVV
AARMVAQLRA VAGTDTGHTA STTVRELRQR SEEFSRLWDR HDVMLQHLET KRLDSPRVGL
LRLNFVSSNV AETGHRLTVM TPADETTSQR LLRLSEVDVD AQRG
|
|---|
| |