Gene Ndas_2688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2688 
Symbol 
ID9246539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp3202033 
End bp3202740 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID 
ProductMgtC/SapB transporter 
Protein accessionYP_003680609 
Protein GI297561635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.269856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAT GGTGGGAGGC CGCGCTCCGG CTCGGCTGCG CGTTCGGACT GGGCGCGCTG 
GTCGGCGTCG AACGCCAGTG GCGGGCGCGC ATGGCGGGCC TTCGCACCAA CGCGCTCGTC 
GCCGTGGGGT CGGCGCTGTT CGTCCTGCTG GCCGCCTACT CCGTCGACGA GGTCAGCCCC 
ACGCGTATCG CCGCCCAGGT GGTGTCGGGC ATCGGCTTCC TCGGCGCGGG CGTCATCCTG 
CGCGACGGCA TCAACATCCG CGGCATCAAC ACGGCCGCGA CGATCTGGTG CGCCGCCGCC 
GTGGGCGTCC TGGCCGGAAG CGGCGTCTAC CTGGTCGCGG CGATGGGCGC GGTGGCGGTG 
GTGGCCGCCA ACGTCCTGCT GCGCCCGGTG GCCCGGCGGC TGCAGAAGAG TTCGCCCGTC 
AACTCCAAGG ACGACGAGAC CGTCTACCGG ATCCGGATCG TGTGCACGAA CGCCCAGGAC 
CCCCACATAC GGGCCCTGCT GCTCCAGGCG CTGTCCGAAA CCGAGTTCAC ACTGCGCTCC 
CTGGACTGCC GCCACCTGGA GGAGGACGAG GAGCTGGTGT CCGTGTACGC CGACATCTTC 
GCCGGCGGAC ACCAGGACGA AGCCGTGGAG CAGCTGGTCA GGAGGCTCAG CCTGGAGCCG 
GAGGTCTCGT CCGTGCGCTG GCAGCAGCTG GACGAGGACG CCGAGTGA
 
Protein sequence
MLEWWEAALR LGCAFGLGAL VGVERQWRAR MAGLRTNALV AVGSALFVLL AAYSVDEVSP 
TRIAAQVVSG IGFLGAGVIL RDGINIRGIN TAATIWCAAA VGVLAGSGVY LVAAMGAVAV 
VAANVLLRPV ARRLQKSSPV NSKDDETVYR IRIVCTNAQD PHIRALLLQA LSETEFTLRS 
LDCRHLEEDE ELVSVYADIF AGGHQDEAVE QLVRRLSLEP EVSSVRWQQL DEDAE