Gene Ndas_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2677 
Symbol 
ID9246528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3186740 
End bp3189106 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNB-ARC domain protein 
Protein accessionYP_003680598 
Protein GI297561624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0391388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG TCTCCGGCCG TGCGGTGCAG GCGCGGGACG TCCGGGGCGG CGTTCACTTC 
CACGGGCACG AGCCCGCTCC CTCCCGTGCT CCGGTGCCCC GGCAGCTCCC CGCGGACGTG
CGCGGGTTCG TCAACCGCGT CGGTGAACTG GCGGTGCTCA GCACACACCT GCACCGCACC
GGCGAGGAAG CGCACGGGTA CGCGGAGTCC ACGCTCCACG TCATCGCCGG TACGGCCGGG
GTGGGCAAGA CGGCTCTGGC CCTGCACTGG GCGCACCTGG CCCGGGAGCA CTTTCCCGAC
GGACAGCTCT ACGTTGACCT GCACGGTTAC GGTCCCGGGC TCCCCATAGC CCCGGAACAG
GTGCTCGACA GGTTCCTACG GGCGTTCGGG GTGTCGGCTG ACTCGATACC CGCCGACCTC
GACAGTCGGT CCGCCCTCTA CCGTTCCCTC CTGGCGGACC GGCGTGTCCT GGTCCTCCTC
GACAACGCGT CGACCACCGC GCAGGTGCGC CCCCTGCTTC CCGGCTCCTC GGGCTGCGTG
GTCCTGGTCA CCAGCAGGGA CCGACTGTCC GGCCTGGTCG CCAGGAACGG AGCGCGGCGT
CTGACCGTGC ACACCCTGGC TTCCGACGAG GCTGTGGAAC TCCTGGAGCA CGTCACCGGC
CACCATCGGC CCAAGGACGA CCCACGGGAG GTGACCGAGT TGGCCCGGCT GTGCGGGCGG
CTCCCCCTTG CCCTGCGCAT CGCCGCCGAG CGTGCGGCCA GCCGTCCGTA CATGCCGCTG
GACGACCTCA TCCAGGACCT GCGCGACGAG TCGGCTCTCT GGGACGCGCT GGCCACCGAC
GACGCGGAGG AGGCCGACGC GGTCCGCTCC GTCTTCGCCT GGTCCTACCG GGCTCTGCCC
GAGGAGGCCG CGCGTCTGTT CCGGCTGCTC GGCCTGCATC CCGGCCAGGA CTTCGACGCG
GGCGCCGCGG CGGTCCTGGC CGAGCTCCCG GTCCGCCGTG TCCGGCGCAC CCTGGACGCC
CTCGTGGGCG CCCACCTTCT GGAGCAGACC GGCACCGACC GCTACCGCTT CCACGACCTG
CTCCGCTCCT ACGCCACCGA CCAGGTACGC CACGAAGAGG AGGGGGAGGC CCGAGAGCGT
GCGCTGCGAC GACTCCTGAC CTGGTACCTG TGTGTGGCGG ACGCCGCGGC CGCAGCCGTG
GGCTCCCACC TGAGGCACAT CGGACCGCCC GAGGAGGAGG CCGGGGAACT CCGTGAGTTC
GCGGACAGCG CGGAGGCGGT CAGGTGGTTC GAGCTGGAGA ACAGGAACCT GACCGCCGCC
GTCGAGACGG CCGTCCCCGC GGGCATGGAC AGCATCGCAT GGCGGCTCGC CTCCGCCCTG
AGGCATTTCC ACACCTTCCA CTCCTTCGAC TCCACATGGC TCACGACCGC CCGCCTCGGG
CTGAAGGCGG CACGGCGGGA GGGCCGTACC TCGACCGAGG CGGACCTGGA GGAGAGCCTG
GGTATGGCTT GTGTACAGGC CAACCGCCCC GAGGAGGGCC TGGTCCACCA CCAGCGTGCG
CTCGGACTGA GGCGGGACGC GGACGACGGG TTCGGTGTCG CCATGTCGCT GAACGCCATC
GGTTTGGCCC GCCTTCGCAC ACACGGGCTC GGTGAGGCCC GTGAGCACTT CGAGCGCTCC
CTCGAACTGG TGGGGCGTGC CGGTGAGCGC CTGTGGGAGG GGATCGTCCT CGGCAACCTC
GCCCAGTGCG TGCTCGAACT GGGTGAACCG GAGGAGGCCA CGGTCCTGGG TGAACGGGCC
ATCGGCATCC ACCGGGAGAC CGGCGACCGG ATGAGCGAGT TCGCCTGCCT GGCCTCTCTG
AGCGCGGCCT GGCGGGAGTT GGGCCGCACC GACCGCGGAC TGTCCTGTGT GCGGCGGGCA
CTGGAGGTCG CCCGCGAACT CGACGACGTC GTCCTGGAGG GGTTCGCGTA TCTAGAGCTC
GGCAGGGACC AAGCTCGGCT CGGGGACTTG GAAGAGGCCC TGCTCTCGTT CCATGAGGCG
GCGGGCCTGC ACCGCCGAAC GGCCGACCAC GTGCGCGAGG CCGAAGCCTT CGAGGGGGTG
GGCGGGGTGT ACACGGCTCT CGAACGCCAC GAGGAGGCTG CGAAGTTCTA CCGGCAGGCG
GTCAGCACGT ACCGCAGGTA CCGGGACCGG TGGAAGCTGG CGGTCTGTCT GGACCGGCTG
GCCTCCGCGC TGGCCGCCTC CGGGGAGGCC GAGACGGCCA GGGGGCACTG GCGCGAGGCA
CTGCAGGCCC TGGAGGGGTT CGCCGACCCC AGGGCCGCGC GCCTGCGCGA GGAGGTCGCC
GCCCGGGTGC GGGGCACGGA CTCCTGA
 
Protein sequence
MSDVSGRAVQ ARDVRGGVHF HGHEPAPSRA PVPRQLPADV RGFVNRVGEL AVLSTHLHRT 
GEEAHGYAES TLHVIAGTAG VGKTALALHW AHLAREHFPD GQLYVDLHGY GPGLPIAPEQ
VLDRFLRAFG VSADSIPADL DSRSALYRSL LADRRVLVLL DNASTTAQVR PLLPGSSGCV
VLVTSRDRLS GLVARNGARR LTVHTLASDE AVELLEHVTG HHRPKDDPRE VTELARLCGR
LPLALRIAAE RAASRPYMPL DDLIQDLRDE SALWDALATD DAEEADAVRS VFAWSYRALP
EEAARLFRLL GLHPGQDFDA GAAAVLAELP VRRVRRTLDA LVGAHLLEQT GTDRYRFHDL
LRSYATDQVR HEEEGEARER ALRRLLTWYL CVADAAAAAV GSHLRHIGPP EEEAGELREF
ADSAEAVRWF ELENRNLTAA VETAVPAGMD SIAWRLASAL RHFHTFHSFD STWLTTARLG
LKAARREGRT STEADLEESL GMACVQANRP EEGLVHHQRA LGLRRDADDG FGVAMSLNAI
GLARLRTHGL GEAREHFERS LELVGRAGER LWEGIVLGNL AQCVLELGEP EEATVLGERA
IGIHRETGDR MSEFACLASL SAAWRELGRT DRGLSCVRRA LEVARELDDV VLEGFAYLEL
GRDQARLGDL EEALLSFHEA AGLHRRTADH VREAEAFEGV GGVYTALERH EEAAKFYRQA
VSTYRRYRDR WKLAVCLDRL ASALAASGEA ETARGHWREA LQALEGFADP RAARLREEVA
ARVRGTDS