| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2654 |
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| Symbol | |
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| ID | 9246505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 3161870 |
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| End bp | 3163018 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transport system permease protein |
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| Protein accession | YP_003680577 |
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| Protein GI | 297561603 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00408489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.22547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAC TCACCGACCC TTCGCGGACC GGTCCGCCCG ACGCGGACGC TCTCCCCGAC
GCCGACCCGC TGGCGGCGCG GGCGGCGGCG GGCGGCGCCG AGGTCCCTCC CGAACGCACA
CCGGGCAGGC TGCGCTCGTC CCTCGTCGTC GCCGCCTTCG TCCTCGCGCT GTGCGTGACG
ATCGTCGTCG CGGCCTTCGT CGGCACGGCG AACATCGGGG CGCTCGACGT GCTCGGGATC
ATCCTGCGCA ACATCGGGCT GGGCGCCCTC GCCCCCGTCC CGGCGGCGCC GCCGCTCATC
GACGCCCTCA TCTGGGAGTC GCGTCTGCCG CGCGTGCTCC TGGCCGCCGT GGTCGGTCTC
GGGCTCTCGG TCTCGGGCGC GGTGCTGCAG TCGATCACCC GCAACCCGCT CGCCGAACCG
TACCTGCTCG GGGTCTCCTC GGGGGCGTCC ACCGGGGCGG TCGCGATCAT GGTGCTCGGG
CTCGGCTCGG GCGCGGTGAC CCTCTCCACG GGCGCCTTCG CCGGGGCGCT GGCCGCCTTC
GCGATCGTGC TGGTCCTCAT CGGGGGCGGA CGCGTCTCCA ACCCCGCCCG CGTGGTGCTC
ACCGGTGTGC TGGTGTCGCA GTTCTTCTCC GCGATCACCT CGCTCGTGCT GATGCTCGAC
GGTGACGCGG ACGCCACCCG GGGCTTCACG TACTGGCTGC TCGGCTCGCT CGGAGGCGCA
CGCTGGGAGC CGCTGCTCGT GGCGTCTGCC GTCATCGTGC TCGGCGCCGT CGGCTGCCTG
TTCTTCGCCC CGGCCCTGGA CGCGTTCACC TTCGGCTGGG ACACCGCCTC CTCGCTCGGG
ATCAACGTGA CCCTGGCACG GGTGACGCTC ATGGTCCTCA CCGCGCTCGT CACGGCGGCG
GCCGTCGCGG CCTCCGGGGC GATCGGGTTC ATCGGGCTGC TCGTACCGCA CGTCGTGCGT
CTGCTGGCGG GGCCCGCGCA CCGCCTGCTG CTCCCCCTCA GCGGGCTCGG GGGCGCGATT
TTCCTGGTGT GGGTCGACAC CTTCGCCCGC TCGGCGTTCT CGCCGCACGA GATCCCGGTG
GGAGTGATCA CGGCGCTGCT CGGCGCACCG GTGTTCGCGG TCGTCCTGGG AAGGGCGGCC
CGGCAATGA
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| Protein sequence | MTRLTDPSRT GPPDADALPD ADPLAARAAA GGAEVPPERT PGRLRSSLVV AAFVLALCVT
IVVAAFVGTA NIGALDVLGI ILRNIGLGAL APVPAAPPLI DALIWESRLP RVLLAAVVGL
GLSVSGAVLQ SITRNPLAEP YLLGVSSGAS TGAVAIMVLG LGSGAVTLST GAFAGALAAF
AIVLVLIGGG RVSNPARVVL TGVLVSQFFS AITSLVLMLD GDADATRGFT YWLLGSLGGA
RWEPLLVASA VIVLGAVGCL FFAPALDAFT FGWDTASSLG INVTLARVTL MVLTALVTAA
AVAASGAIGF IGLLVPHVVR LLAGPAHRLL LPLSGLGGAI FLVWVDTFAR SAFSPHEIPV
GVITALLGAP VFAVVLGRAA RQ
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